SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|344211683|ref|YP_004796003.1| from Haloarcula hispanica ATCC 33960

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|344211683|ref|YP_004796003.1|
Domain Number 1 Region: 10-181
Classification Level Classification E-value
Superfamily Ribosomal protein S5 domain 2-like 1.21e-19
Family GHMP Kinase, N-terminal domain 0.005
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|344211683|ref|YP_004796003.1|
Sequence length 292
Comment shikimate kinase [Haloarcula hispanica ATCC 33960]
Sequence
MEGKAAAPAAGTVLNALATGRGAAFAIDEYTTATVTLSTETDGVTGEVDGAPDADTRLIE
RCVEYVIDAHGGPQNVGVPAVSGGTVRTESEVPMASGLKSSSAAANATVMATLDALDATE
RMSREDMARLGVMAARDVGVTVTGAFDDASASMLGGVTVTDNEDDALLAREEIDWDVLVW
TPPEQSFSADADVERCRQIAPMARLVEDLALDGDYQRAMTVNGLAFSAALDFETDPVLDA
LQHVEGVSLSGTGPSFTAVGERAALEAVQDAWDERPGATWLTTTQTKGTHTV
Download sequence
Identical sequences A0A0B5GLX8 G0HQL9 V5TMA7
gi|344211683|ref|YP_004796003.1| gi|564289664|ref|YP_008875918.1| WP_014040253.1.27393 WP_014040253.1.67629 WP_014040253.1.92404 WP_014040253.1.92869

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]