SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|389847473|ref|YP_006349712.1| from Haloferax mediterranei ATCC 33500

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|389847473|ref|YP_006349712.1|
Domain Number 1 Region: 2-211
Classification Level Classification E-value
Superfamily ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 2.23e-46
Family DNA gyrase/MutL, N-terminal domain 0.0000404
Further Details:      
 
Domain Number 2 Region: 360-544
Classification Level Classification E-value
Superfamily DNA mismatch repair protein MutL 1.57e-38
Family DNA mismatch repair protein MutL 0.014
Further Details:      
 
Domain Number 3 Region: 187-331
Classification Level Classification E-value
Superfamily Ribosomal protein S5 domain 2-like 4.55e-27
Family DNA gyrase/MutL, second domain 0.0019
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|389847473|ref|YP_006349712.1|
Sequence length 550
Comment DNA mismatch repair protein MutL [Haloferax mediterranei ATCC 33500]
Sequence
MIHRLDPQTRSKIAAGEVATRPASVVVELVENALDAGAGTVEIEVGGDGTDRIRVADDGH
GMSESDAELAVEHHTTSKLTEADDIETVETLGFRGEALPSIAAVSRLELTTNTGGPRGTR
VVVEDDETTVSPAGRAKGTTVEVTDLFADRPARKKALASPKAEFARISAVVTRYALTRPD
VRFVLRHDGHETLTTPGTGRFADVMLAVYGRDAASHASTFDSVREVKAGGETATVEIDGL
LCYPDVTRSRRDHVHVSVNGRALAEPRIRRAVVEGYGTLLPDGREPVGVVRVNLPPEWVD
HNVHPAKDEVGFRDADAVAEAVESSVRDALSTADLRRSGELAMDLDSSLEPVSAESVFDE
IRVIGRFRELYLLCEADDDLLVVDQHAAHERINYERLREAVETAGIDSVAVDPPATVSLS
STDVALLEANRGVVEALGFRIAEFGDGTYRVGAVPAPLGRPFSPDALTDVVADVAAGDVS
DPRDELLKDLACHPSIKAGDDLTDEDATRLVERLGSCETPYACPHGRPTVLSIDEETFVR
GFGRRSGRRG
Download sequence
Identical sequences I3R665
gi|389847473|ref|YP_006349712.1| WP_004059371.1.26851 WP_004059371.1.35700 WP_004059371.1.77170

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]