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  Home > Genomes > Ailuropoda melanoleuca 76_1 > ENSAMEP00000008780

Domain assignment for ENSAMEP00000008780 from Ailuropoda melanoleuca 76_1

Domain architecture

Domain assignment details

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Strong hits

Sequence:  ENSAMEP00000008780
Domain Number 1 Region: 53-240,386-592
Classification Level Classification E-value
Superfamily Oligoxyloglucan reducing end-specific cellobiohydrolase 5.75e-49
Family Oligoxyloglucan reducing end-specific cellobiohydrolase 0.0076
Further Details:      
 
Domain Number 2 Region: 718-971
Classification Level Classification E-value
Superfamily YWTD domain 2.09e-46
Family YWTD domain 0.00000825
Further Details:      
 
Domain Number 3 Region: 1517-1702
Classification Level Classification E-value
Superfamily Fibronectin type III 7.82e-30
Family Fibronectin type III 0.0014
Further Details:      
 
Domain Number 4 Region: 1892-2065
Classification Level Classification E-value
Superfamily Fibronectin type III 8.93e-17
Family Fibronectin type III 0.0057
Further Details:      
 
Domain Number 5 Region: 1374-1411
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000000406
Family LDL receptor-like module 0.001
Further Details:      
 
Domain Number 6 Region: 1153-1191
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000000484
Family LDL receptor-like module 0.00074
Further Details:      
 
Domain Number 7 Region: 1110-1151
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000111
Family LDL receptor-like module 0.00076
Further Details:      
 
Domain Number 8 Region: 1281-1317
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000144
Family LDL receptor-like module 0.0011
Further Details:      
 
Domain Number 9 Region: 1327-1361
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000183
Family LDL receptor-like module 0.00095
Further Details:      
 
Domain Number 10 Region: 1034-1074
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000209
Family LDL receptor-like module 0.0011
Further Details:      
 
Domain Number 11 Region: 1196-1229
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000157
Family LDL receptor-like module 0.002
Further Details:      
 
Domain Number 12 Region: 1428-1465
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000236
Family LDL receptor-like module 0.0015
Further Details:      
 
Domain Number 13 Region: 1707-1840
Classification Level Classification E-value
Superfamily Fibronectin type III 0.0000000391
Family Fibronectin type III 0.0067
Further Details:      
 
Domain Number 14 Region: 1468-1507
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000458
Family LDL receptor-like module 0.0012
Further Details:      
 
Domain Number 15 Region: 1078-1111
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000209
Family LDL receptor-like module 0.0011
Further Details:      
 
Domain Number 16 Region: 1233-1268
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000288
Family LDL receptor-like module 0.0025
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSAMEP00000008780   Gene: ENSAMEG00000008234   Transcript: ENSAMET00000009155
Sequence length 2172
Comment pep:known_by_projection scaffold:ailMel1:GL192378.1:1965606:2113753:1 gene:ENSAMEG00000008234 transcript:ENSAMET00000009155 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence 
GPXPLPQDRGFRVVQGEPREPGLWARGGPRGXKPLRRRRSAALQPEPIKVYGQVSLNDSH
NQMVVHWAGEKSNVIVALARDSLALARPRSSDVYVSYDYGKSFKRISEKLSFGVGNSSEA
VIAQFYHSPADNKRYIFADAYAQYLWITFDFCNTIQGFSIPFRAADLLLHSKASNLLLGF
DRSHPNKQLWKSDDFGQTWILIQEHVKSFSWGIDIYDKPNTIYVERHEPSGYSTVFRSTD
FFQSRENQEVILEEVKDFQLRDKYMFATKVVHLWGIPQPSSVQLWVSFGRKPMRAAQFVT
RHPINEYYIADASEDQVFVCVSHSNNRTNLYISEAEGLKFSLSLENVLYYSPGGAGGDTL
VRYFANEPFADFHRVEGLQGVYIATLINGSMNEENMRSVITFDKGGTWEFLQAPAFTGYG
EKINCELAQGCSLHLAQRLSQLLSLQLRRMPILSKESAPGLIIATGSVGKNLASKTNVYI
SSSAGARWREALPGPHYYTWGDHGGIIMAIAQGMETNELKYSTNEGETWKTFIFSEKPVF
VYGLLTEPGEKSTVFTIFGSNKENVHNWLILQVNATDALGVPCTENDYKLWSPSDERGNE
CLLGHKTVFKRRTTHATCFNGEDFDRPVVVSNCSCTREDYECDFGFKMSEDLALEVCVPD
PEFSGKSYSPPVPCPVGSTYRRTRGYRKISGDTCSGGDVETRLEGELVPCPLAEENEFIL
YAMRKSIHRYDLASGATEQLPLTGLRAAVALDFDYEHNCLYWSDLALDTIQRLCLNGSTG
QEVIISSGLETVEALAFEPLSQLLYWVDSGFKKIEVANPDGDFRLTIVNSSVLDRPRALV
LLPQDGVMFWTDWGDLKPGIYRSNMDGTAVHCLVSEDVKWPNGISVDDQWIYWTDAYLDC
IERITFDGQQRSIILDNLPHPYAIAVFKNEIYWDDWSQLSIFRASKHSGSQMAVLASQLT
GLMDMKIFYKGKTMGSNACVSRPCSLLCLPRANNSRSCRCPDGVASSVLPSGDLMCECPQ
GYQRENNTCVKEENTCLRNQYRCSNGNCINSIWWCDFDNDCGDMSDERNCPTTVCDLDTQ
FRCQESGTCIPLSYKCDLEDDCGDNSDETHCEMHQCRSDEYSCSSGMCIRSSWVCDGDND
CRDWSDEANCTAIYHTCEASNFQCRNGHCIPQRWACDGDMDCQDGSDEDPVNCEKKCNGF
RCPNGTCIPSSKHCDGLRDCSDGADEQHCEPLCTRFMDFVCKNHQQCLFHSMVCDGIVQC
RDGSDEDAAFAGCSQDPEFHKVCDEFSFQCQNGVCISLIWKCDGMDDCGDYSDEASCENP
TEAPNCSHYFQFQCDNGHCIPNRWKCDRENDCGDWSDERDCGDSHILPSPTPGPSTCLPN
YYRCSSGACVMDSWVCDGYRDCADGSDEEACPSPANVTTASVPTHHGRCDRFEFECHQPK
KCIPNWKRCDGHQDCQDGQDEANCPTHSTLTCMSTEFKCEDGEACIVLSERCDGFLDCSD
ESDERACSDELTVYKVQNLQWTADFSGDVTLTWTRPKKMPSAACVYNVYYRVVGEGIWKT
VETHSNKTNTILKVLKPDTTYQVKVQVQCLSKVHNTNDFVTLRTPEGLPDAPQNLQLSLR
REEEGVIVAHWIPPTHTHGLIREYIVEYSRSGSKMWASQRAASNFTEIKNLLVNAPYTVR
VAAVTSRGVGNWSDSKSITTVKGKVIPPPDIHIDSYSENSLSFTLTVESDIKVNGYVVNL
FWAFDTHKQEKRTLNFRGSILSHKVANLTAHTSYEISAWAKTDLGDSPLAFEHVTTKGVR
PPAPSLKAKAINQTAVECTWTGPRNVVYGIFYATSFLDLYRNPKSLTTSLHNKTVIVSRD
EQYLFLVRVVVPYQGPSSDYVVVRMIPDSRLPPRHLHAVHIGKTSAVIKWESPYDSPDQD
LLYAVAVKDLIRKSDRSYKIKTRNSTVEYTLSKLEPGGKYHIVVQLGNMSKDSSIKITTV
SLSAPDALKIITENDHVLLFWKSLALKEKHFNESRGYEIHMFDSAMNISAYLGNTTDNFF
KISNLKLGHNYTFTVQARCLFGSQICGEPAVLLYDELGSGGDASAFQAARSTDVAAVAVP
ILFLTLLSLGVGFAILYTKHRRLQNSFTAFANSHYSSRLGSAVFSSGDDLGEDDEDAPMI
TGFSDDVPMVIA
Download sequence
Identical sequences G1LP00
ENSAMEP00000008780

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.