SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSAMEP00000004967 from Ailuropoda melanoleuca 69_1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSAMEP00000004967
Domain Number 1 Region: 481-619,647-819
Classification Level Classification E-value
Superfamily WD40 repeat-like 1.4e-40
Family WD40-repeat 0.011
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSAMEP00000004967   Gene: ENSAMEG00000004681   Transcript: ENSAMET00000005166
Sequence length 844
Comment pep:novel scaffold:ailMel1:GL192872.1:1005720:1094270:1 gene:ENSAMEG00000004681 transcript:ENSAMET00000005166 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
PPGKHSRASAGAANAGVWGRGWPTTQQSVATMPISPVNSRKQQNLWLNNETQPKKSISFT
NTVKGGQTKGYIGANQSRMAMSKTLMVLPEIKTEKMNISTPRTAIQVINALGVDVTPRPL
YHQDPHMGTAKPNKLLTSQEGSYSSDYISSYSLYQNTINPSMLGQFTRSVLGSSSVSKSS
ASTTESIAEDLEEPSYKREKLTSFTDLRVVRATPEKIVTKEDLQKTIEITLTETETLSFF
NLPTVLISVESEEAEKVIRRNKIYETLCRNRLGNDLYVERMMQTINGAPKNKEVQCDKIV
KEDKGVMSSTWDLYDSYNAMDLSPLPTKQSMLESTSKASIPSKDREQRVIGSTIEKNSEA
SSLMDIENVILTKIRDDEEDHSESIMKSDKFRQDLFFMERVLMENLFQPKLAAYHQLPVL
KEPEPEGPEDFLEGEKLEQETEEEVKKEEEEEIEIGTEESTIPANLERLWSFSCDLTKGL
NVSSLAWNKTNPDLLAVGYGHFGFKEQKRGLACCWSIKNPMWPERIYQSPYGVTAVDFST
GAPNLLAVGYHNGTIAIYNVQSNSNVPVLDSSESPLKHLGPVWQLQWIEQDRGTTGDDKR
EILVSISADGRISKWVIRKGLDCHDKDLMRLRRTTVSSSKKGGEKEKKGEALISRQAPGM
CFAFHPKDTNIYLAGTEEGHIHKCSCSYNEQYLDTYRGHKGPVYKIAWNPFCHDVFLSCS
ADWGVIMWQQENTNPFLSFYPTTYVVYDVAWSPKSSCIFAVANESRVEIWDLHVSTLDPL
IVNVANPGIKFTTVLFAKQTDCLLVGDSDGQVAVYELRNMPTALDSGQGDIIDTLLGPKS
NQQG
Download sequence
Identical sequences G1LDI5
ENSAMEP00000004967 ENSAMEP00000004967

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]