SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSAMEP00000011164 from Ailuropoda melanoleuca 69_1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSAMEP00000011164
Domain Number 1 Region: 34-125
Classification Level Classification E-value
Superfamily Retrovirus capsid dimerization domain-like 1.92e-37
Family SCAN domain 0.0000357
Further Details:      
 
Domain Number 2 Region: 471-528
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 6.78e-25
Family Classic zinc finger, C2H2 0.0039
Further Details:      
 
Domain Number 3 Region: 584-641
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.19e-23
Family Classic zinc finger, C2H2 0.0051
Further Details:      
 
Domain Number 4 Region: 630-682
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 3.27e-18
Family Classic zinc finger, C2H2 0.0023
Further Details:      
 
Domain Number 5 Region: 434-485
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 3.41e-18
Family Classic zinc finger, C2H2 0.005
Further Details:      
 
Domain Number 6 Region: 513-559
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.0000000000000303
Family Classic zinc finger, C2H2 0.0052
Further Details:      
 
Domain Number 7 Region: 211-267
Classification Level Classification E-value
Superfamily KRAB domain (Kruppel-associated box) 0.00000000000157
Family KRAB domain (Kruppel-associated box) 0.0054
Further Details:      
 
Domain Number 8 Region: 376-418
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.00000000106
Family Classic zinc finger, C2H2 0.013
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSAMEP00000011164   Gene: ENSAMEG00000010624   Transcript: ENSAMET00000011642
Sequence length 684
Comment pep:novel scaffold:ailMel1:GL193204.1:160251:165847:1 gene:ENSAMEG00000010624 transcript:ENSAMET00000011642 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MASGPGSQDREGLLIVKLEEDCAWSQELPPPDPGPSPEASHLRFRRFRFQEAAGPREALS
RLQELCHEWLRPELRTKEQILELLVLEQFLTILPQEIQSRVQELHPESGEEAVALVEDMQ
RELGRLRLQVTNHRRGTEVLLEEPLPLETARESPSFKLEPMETERSPGPRLQELLGPSPK
RDPQAVKERALSAPWLSLFPAEGNMEDKEMTGPQLPESLEDVAMYISQEEWGHQDPSKRA
HSRDTVQESYENVDSLESQVPSQEALSTQVEQGGNPWDPSVQTCKEGLRPRSPAPGEEKF
ENEEESAQSVSPESIHPQALLPGQARGEVPWSPEQGTPRDRAEGHWEPPPEEGMEPSLVG
ATSCRELGRPKELQPRKLHLCPLCGKNFSNNSNLIRHQRIHAAERLCMGVECGEIFGGNP
HFLSLHRAHLGEEAHKCLECGKSFSQNTHLTRHQRTHTGEKPYQCTVCGKSFSCNSNLHR
HQRTHTGEKPYKCPECGEIFAHSSNLLRHQRIHTGERPYKCAECGKSFSRSSHLVIHERT
HEKERLYPFSECGEAVSDSTLFLTNHGTHKAEKKLFECLTCGKSFRQGMHLTRHQRTHTG
EKPYKCNLCGENFSHRSNLIRHQRIHTGEKPYTCHECGDSFSHSSNRIRHLRTHTGERPY
KCSECGESFSRSSRLMSHQRTHTG
Download sequence
Identical sequences D2HQZ6
ENSAMEP00000011164 XP_002924941.1.58354 ENSAMEP00000011164

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]