SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ppa002338m|PACid:17652761 from Prunus persica v139

Domain architecture


Domain assignment details

(
show help)

No Significant Hits.

Weak hits

Sequence:  ppa002338m|PACid:17652761
Domain Number - Region: 63-122,400-468,506-595
Classification Level Classification E-value
Superfamily TPR-like 0.000109
Family Tetratricopeptide repeat (TPR) 0.013
Further Details:      
 
Domain Number - Region: 169-294
Classification Level Classification E-value
Superfamily TPR-like 0.0104
Family BTAD-like 0.05
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) ppa002338m|PACid:17652761
Sequence length 685
Sequence
MSCYLLDSCIRTKSARDAHRIHARVIKTQFSSEIFIQNRLIDAYGKCGCLDDARKLFDKM
PQRNTFTWNSIISTLTKLGFIDDAVQIFRLMPEPDQCSWNSMVSGFAQHDRFEEALEYFV
KLHVEDFVLNEYSFGSALSACAGLRKLKMGVQIHAFIAKSCYSSDVYMGSALIDMYSKCG
SVASAQRVFDWMSDRNTVSWNSLITCYEQNGPASEALEVFVRMMDGGFKPDELTLASVVS
ACASLSAIKEGQQIYAHVIKCDKYRDDLVLGNALVDMYAKCNRLKQARWIFDGMPVRNVV
SETSMVSGYAKAASVKAARLMFAKMMERNIVSWNALISGYTQNGENEEAVGLFLLLKRES
VLPTHYTFGNLLNACASLVDLQLGRQAHVHLLKHGFKFQVGEEPDIFVGNSLIDMYMKCG
SIEDGCRVFKSMLERDYVSWNAMIVGYAQNGYGTEALEIFRKMLASGEQPDHVTMIGVLC
ACSHAGLVDEGKEYFYSMSEEHGLVPLKDHYTCMVDLLGRAGCLDEAKHLIEVMPMQPDA
VIWGSLLAACKVHRNITLGKYVAEKILDIEPRNSGPYVLLSNMYAELGRWGDVVTVRKLM
RQRGVIKQPGCSWIEIQGRVHVFMVKDKRHPQCKEIHYLLKLLIEQMKQSGYVEDACDHD
ICEEHGETELTSLYDIDMLEDAALG
Download sequence
Identical sequences M5WEW0
ppa002338m|PACid:17652761

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]