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  Home > Genomes > Proterospongia sp. ATCC 50818 > PTSG_03216T0

Domain assignment for PTSG_03216T0 from Proterospongia sp. ATCC 50818

Domain architecture

Domain assignment details

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Strong hits

Sequence:  PTSG_03216T0
Domain Number 1 Region: 1068-1112
Classification Level Classification E-value
Superfamily TNF receptor-like 0.00000215
Family TNF receptor-like 0.005
Further Details:      
 
Domain Number 2 Region: 901-937
Classification Level Classification E-value
Superfamily TNF receptor-like 0.00000432
Family TNF receptor-like 0.0051
Further Details:      
 
Domain Number 3 Region: 271-322
Classification Level Classification E-value
Superfamily TNF receptor-like 0.00000706
Family TNF receptor-like 0.0039
Further Details:      
 
Domain Number 4 Region: 1416-1453
Classification Level Classification E-value
Superfamily TNF receptor-like 0.000011
Family TNF receptor-like 0.006
Further Details:      
 
Domain Number 5 Region: 324-364
Classification Level Classification E-value
Superfamily TNF receptor-like 0.0000471
Family TNF receptor-like 0.0045
Further Details:      
 
Weak hits

Sequence:  PTSG_03216T0
Domain Number - Region: 406-443
Classification Level Classification E-value
Superfamily TNF receptor-like 0.000139
Family TNF receptor-like 0.0054
Further Details:      
 
Domain Number - Region: 765-931
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.000188
Family Growth factor receptor domain 0.0042
Further Details:      
 
Domain Number - Region: 1369-1418
Classification Level Classification E-value
Superfamily TNF receptor-like 0.000334
Family TNF receptor-like 0.0086
Further Details:      
 
Domain Number - Region: 532-571
Classification Level Classification E-value
Superfamily TNF receptor-like 0.000377
Family TNF receptor-like 0.0054
Further Details:      
 
Domain Number - Region: 1285-1327
Classification Level Classification E-value
Superfamily TNF receptor-like 0.000968
Family TNF receptor-like 0.01
Further Details:      
 
Domain Number - Region: 944-986
Classification Level Classification E-value
Superfamily TNF receptor-like 0.00184
Family TNF receptor-like 0.0075
Further Details:      
 
Domain Number - Region: 1026-1062
Classification Level Classification E-value
Superfamily TNF receptor-like 0.00278
Family TNF receptor-like 0.0074
Further Details:      
 
Domain Number - Region: 446-477
Classification Level Classification E-value
Superfamily TNF receptor-like 0.00706
Family TNF receptor-like 0.009
Further Details:      
 
Domain Number - Region: 1458-1501
Classification Level Classification E-value
Superfamily TNF receptor-like 0.00785
Family TNF receptor-like 0.0081
Further Details:      
 
Domain Number - Region: 984-1018
Classification Level Classification E-value
Superfamily TNF receptor-like 0.0255
Family TNF receptor-like 0.0063
Further Details:      
 
Domain Number - Region: 666-691
Classification Level Classification E-value
Superfamily TNF receptor-like 0.0494
Family TNF receptor-like 0.0082
Further Details:      
 
Domain Number - Region: 1211-1271
Classification Level Classification E-value
Superfamily TNF receptor-like 0.0549
Family TNF receptor-like 0.007
Further Details:      
 
Domain Number - Region: 690-749
Classification Level Classification E-value
Superfamily TNF receptor-like 0.0628
Family TNF receptor-like 0.0049
Further Details:      
 
Domain Number - Region: 642-667
Classification Level Classification E-value
Superfamily TNF receptor-like 0.0673
Family TNF receptor-like 0.0048
Further Details:      
 
Domain Number - Region: 1047-1064,1163-1211
Classification Level Classification E-value
Superfamily Multiheme cytochromes 0.1
Family Di-heme elbow motif 0.042
Further Details:      
 
Domain Number - Region: 1140-1164
Classification Level Classification E-value
Superfamily TNF receptor-like 0.1
Family TNF receptor-like 0.0067
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) PTSG_03216T0
Sequence length 1660
Comment | PTSG_03216 | Salpingoeca rosetta predicted protein (1661 aa)
Sequence 
MRLPGILRLWNNPDSDTECVCQASCGSGTISADCSRCECEPNQGCKGGRCRRYITSTGDE
PLAWFDDFPPTCTNCQCLDIDCNTTYSNAWPDSIGYCRCLSAQATCDVFGCQSGHILYGR
FIRLFQESCEECVCNEAQPACSQPGINLADIRDDWVFEGSLDCTSGDPEPFTLTDLRWED
GQVTASIYTTVSGHIGGWKLRSSFFNNDTGCVYLDRESGWVINPNNGDDVKRYSQVSLRG
QFYNDGTTLRFDGLIPECKSSPLASSLAAPCDYNTEYRNYRGICTPLSDCGVGYQILTPA
TETTDRVCAPCTTGTFADSLNQDECTAWTNCVPGNEESVAPTSSSDRQCIPCGSGTYSDT
VNAESCTSHKQCPTGEAEVVAPTPSSDRVCSTCDGVNTYEAPDGDGCIDISRCDPGTYET
ADPTLSSDRMCAACQSGKYQSQPDEEECIPFTTCHAGSFVTLLPTSSSDRVCQACDGVLR
YQNETNALSCKSVTTCGSGQEEAVPPTPASDRSCVNCVLGETFKVEAGSSTRCNNVTTCD
AGTQENTAPTISSDRQCEPCPSGSYKETAGNFPCRVSPQGTYKATIGPEACSVWTECNAD
QYESVSPDASTNRKCTDLTVCGADEFELEAPTETRDRVCADCSVCPPTHEETMPCTDTSD
TVCLECKTCPPEEYLVVRCSNSTDGVCGACDTCGSGQYEISPCKDSRNRVCADTTPCTET
QFEYQPPTVTTNRVCTNFTVCTPNVQYEAVAPTATGDRMCEDISPSCSAGYEQTQDPSST
TDRECRMCPAGTIDHDSDPLTPCVGCPTGTHVLAGSFGECSQFECVPGKADLDRNASTHC
ETCPSGTFQNLHGQTECNPWSSCPPGTQAVPGSASTVNDRQCASCDLGVTFSDTNTTAEP
CRDVTVCPAGYHEDTPPTLTSDRVCVPCPSGTFSATVGQGLCHEWHVCEAGRGETTAPTS
SSDRVCSLCQLGTTYQPHDNATTPCLVVSECNPGFEETEAPTLSTDRVCQQCVLGETFKA
GVGEGDCQLVSSCPPGKEQKTAPTLSTDRECQQCQLGVTFKALAGQAPCITTTACGPGKY
MTVAPTRSSDRQCMTCESGKFKSSASNQDPCLLVRPPCEEGEYQSRNPTPSSDRECSAIS
TCAEGYFEFLPATATSDTQCEQCRQCPEQHIQIAPCNRTTNTQCEGCSSCPSGHFASRAC
TTFNDTVCKVCSSCALDEQYHLQPCTETSDTVCAPRSTCQPWQYDAREPNSVLDRLCTNI
TACKQGEEYETAEPTATSDRVCLQATECELGTELVSPLTPTSDRVCRACPRGFADHDLDP
STPCEACAVGTYSDEQQYGRCEQCRLGTSEEDADPRTPCTTCEPESYQNRIVQVGCMSAR
VCGVGFEEALSPTVTSDRVCVACSNHTFKAVPGNDIECKPFSKCGPGTQLVSHGTATHDT
QCEVCPLGKWKDDDSEFPCNPVHTCFDGEITAIRPTPSSDRVCSACAFGTYATSRSDDAV
CADWTDCNRAVQFEFVAPTSSSDRQCADLRTCTETQYEDAAPTATTDRVCRARSELHTFR
VWMNASYVEYALASPSHELESALESTLRERVAAVRGYVEVVLEENSVLAEDRTVANVSAR
SVAARAQVEALGEFEVEVQGTAILSVLYTEDEAIAARMGT
Download sequence
Identical sequences PTSG_03216T0

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Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.