SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for PTSG_06990T0 from Proterospongia sp. ATCC 50818

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  PTSG_06990T0
Domain Number 1 Region: 115-331
Classification Level Classification E-value
Superfamily NHL repeat 0.000000000000157
Family NHL repeat 0.019
Further Details:      
 
Domain Number 2 Region: 303-422
Classification Level Classification E-value
Superfamily NHL repeat 0.0000942
Family NHL repeat 0.032
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) PTSG_06990T0
Sequence length 423
Comment | PTSG_06990 | Salpingoeca rosetta conserved hypothetical protein (424 aa)
Sequence
MSRQQLHLHLLTLLTATVVAAAVVLVGWGGSVCSAKAVLVEDGATGALHINTSDPTQSPV
FVNGMDVMKLYELVQQQQSMIEAGNEVNQAQQQTLAALRARVCHPRMNLTAITGVGTGTY
KWVGSVLAPNGLIYAIPHGATAVLIIDPATNTADTTTITDLGPGYKWAGGVLADNGRIYA
FPNDATSVLVIDPATNATDTTLGSFSPGMSLWNSGVLAPNGLIYGIPRHNDSALIIDPAN
NTTDITTITGLGTESNKWFGGAVASNGRIYACPMAADAVLIIDPATNTADTTSITGLGDG
LKWTGTVLAPNGYIYGIPRAASSVLIVDPSSNTADTTTISGLPSGDRKWFGGVLAPNGNV
VGIPNYATSVLFVDPTTDTADTTSLGGLPTGGNLWIGGAVAPNGLIYATPYFADAVLIID
SDC
Download sequence
Identical sequences F2UFE1
PTSG_06990T0 XP_004992394.1.12839

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]