SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for PTSG_08477T0 from Proterospongia sp. ATCC 50818

Domain architecture


Domain assignment details

(
show help)

No Significant Hits.

Weak hits

Sequence:  PTSG_08477T0
Domain Number - Region: 94-145
Classification Level Classification E-value
Superfamily TNF receptor-like 0.0146
Family TNF receptor-like 0.0066
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) PTSG_08477T0
Sequence length 1424
Comment | PTSG_08477 | Salpingoeca rosetta predicted protein (1425 aa)
Sequence
MLCDLEPDLPPPELHYFSWTCPDCRCELKDPSVAHARPCSEAEWFDNKLGICLPLTNCPP
GTKVFLQATPGTFSETHNALECSRFSQCDPSMHVIGREGTPSSDRLCLCAPGYRHIGSIT
DSNGSGSGGANDNPTCEPCAPGTYTIWPGDITCTSQPSCPPGVQLVGVPSLRNLNHIVTC
PLGFFKASHSCSDKCTPARSCAPVGVEYEVTPPTPSTDRVCTAVTACNASAQYVARPATS
TSDTVCRHLPPCHPHQFEDVHARTQTQPNRVCHNTTVCVLGQTFQVKPPTPTSDRICQSV
SRCEVEATAATLTSDAVCAATNTTATGCTSAQYYDIQAQDCVPLTTCSFHLDEYEVTPPT
LTSDRVCQRCTRCSALQYEARSPTLTSDRLCSNMTTCGGSQYVALLATAHAGAACSNVST
CSSQEYEAVRPTATSDRVCKPFRSCQRGEFEWTPPTPTCDRQCVYARVCHPGEYMLQAPT
ATTDTRCEHLTECAPGQYETKAPTPTTDRVCDAHTNCRPYTYVLVEATPTTDRTCVPVQH
CPATSYQVAPATTTSNIVCAPYSQCTASEYVAGEPTSTSDVQCANITECDFPAFFRARAA
SGAMDTVCQPVTTCGEMQFEERAPTVTSDRTCSDVTPCDWDVQYMAVPPTPTSDCECANM
TACKPPAYEVRAPTFSSDRLCSIAPVTHLVTVTVTVPMLNFSSDHERERVEAALAAAVRT
PPVLAVGFVGVRWMKAPVFAALLDLQDDNAAARLLSLDAFTVVDPRSGGMIVGRPTSLSP
SVITTTAGGRGGGGGDGAGDGSGSGGDGGGAGGGGGGDNGQSGDQGGEAARSHLMVFVAL
GAVCVVIVVAACVVLVVVLRDKPAPAIPHVRCGSTRRRESALSVISTSTSTSTGAGRHAR
GTSQASTARRHRERAQHQGHRRQRHGDGGGGDDDGVVVDQHGCGWARLGCLVPCRGEPKL
RPVPSLSSTSLSASSSIGLASTSSPCTVNGDGDDGRFQHGYASRHARSHQRHGYDHGHGH
STTSLDMLLPSCDEEDRDTPDMPAGTRTHQPPHTAHLWQQAHLSGTQAAEMTRPGVQHHL
STSIDDMPLSAVQDESSVYSSSPHLPTTTDVASAASSSPHVTHHGGRATYERIELRPLRR
CTSSSSHRPPTAMSPTACSFAAWASTHPSSSEPPSVGPHSRLSTYTRLRPLGRATRDTGA
QAELEVQCNAVPVPVQARGAWHACHLEEDEEKEEQESLCRSGRLLHGIQERYEEEEEEEE
EEEEEWVEEVEEGEEEGEEMGDVMNLNAVAECRSGSGNSGMRQLWRVQRSDVRTAGTCQR
GGGDDNTDDEESVVESETHGDDDAQQCDDAKRARRWQRGEQRNTDNVHGEDEEAFVFERV
THGMAGLVPAMTPSRYMFGESLRDMPLVPSRRRAGEKEQAGAEC
Download sequence
Identical sequences PTSG_08477T0

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]