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Domain assignment for PH01000426G0080 from Phyllostachys heterocyclavar. pubescens

Domain architecture


Domain assignment details

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Strong hits

Sequence:  PH01000426G0080
Domain Number 1 Region: 1-73
Classification Level Classification E-value
Superfamily Ankyrin repeat 0.000000000233
Family Ankyrin repeat 0.0032
Further Details:      
 
Weak hits

Sequence:  PH01000426G0080
Domain Number - Region: 208-238
Classification Level Classification E-value
Superfamily CCCH zinc finger 0.00216
Family CCCH zinc finger 0.0038
Further Details:      
 
Domain Number - Region: 241-272
Classification Level Classification E-value
Superfamily CCCH zinc finger 0.0981
Family CCCH zinc finger 0.0052
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) PH01000426G0080
Sequence length 652
Comment PH_genemodel_v1 PH01000426..41780..44820 . + . ID=PH01000426G0080;Name=zinc finger family protein, putative, expressed
Sequence
MVAATYGSLAALRLLLSLPSVDVNRRCSPDGTTALHCAASGGSPSAVEAVKMLLVVGADA
EATDASGCRPADVISVPPKMLDAKIALQDILGCPKAEHAVLRVATPRATNSISPPVSSPT
AEDARSPSAAAMMTTKFADLPRVATSEKKEYPVDPSLPDIKNSIYASDEFRMYSFKIRPC
SRAYSHDWTECPFVHPGENARRRDPRKYHYSCVPCPDFRKGVCRRGDMCEYAHGVFECWL
HPAQYRTRLCKDGTSCNRRVCFFAHTTDELRPLYVSTGSAVPSPRASATAAMEMAAAMGL
MPGSPSSVSAVMSPFTPPMSPSGNGMPPSLGWQQPNVPTLHLPGSSLQSSRLRTSLSARD
MPAGDYSLMQDIDSQLINDLYSRLGSSAGNHTSRTKTLNPSNLDDLFSAEMVSSPRYSNA
DQGAMFSPSHKAAILNQFQQQQQALLSPINTGVFSPKAVENQQLPSHSSLLQASLGMSSP
GRMSPRCVESGSPMSSHLAAALAQREKQQQTMRSLSSHDLGPSAARASALVGSPLSSSWS
KWGSPSGTPDWGVNGEELGKLRRSSSFELRSGGDDPDLSWVHTLVKESPPEKQVTTSESI
NSVGPSPLMPPSVSNGEGSSLNTQLDGHDQAAVIGALLERMQLDKQIGSLAT
Download sequence
Identical sequences PH01000426G0080

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