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Domain assignment for PH01000812G0040 from Phyllostachys heterocyclavar. pubescens

Domain architecture


Domain assignment details

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Strong hits

Sequence:  PH01000812G0040
Domain Number 1 Region: 125-174
Classification Level Classification E-value
Superfamily Eukaryotic type KH-domain (KH-domain type I) 0.0000796
Family Eukaryotic type KH-domain (KH-domain type I) 0.0095
Further Details:      
 
Weak hits

Sequence:  PH01000812G0040
Domain Number - Region: 389-529
Classification Level Classification E-value
Superfamily LigT-like 0.0105
Family 2'-5' RNA ligase LigT 0.042
Further Details:      
 
Domain Number - Region: 267-337
Classification Level Classification E-value
Superfamily LigT-like 0.0575
Family 2'-5' RNA ligase LigT 0.042
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) PH01000812G0040
Sequence length 621
Comment PH_genemodel_v1 PH01000812..20691..32083 . - . ID=PH01000812G0040;Name=KH domain containing protein, putative, expressed
Sequence
MEASLNTSSSPKSKLKCVKLGSFNYLLVKERGFVPEVVEADLEETSNSGSKQVVENFITG
SENLASDGTTDVVIEVIANNASSSEKKIGSSTTKVVIEDSTEITGFNKDLDGSNISKKYS
SSLEKQIEQETGVKIICPSSKEETLVGLEGKSAESIRKASGRIAKVHEEAVKSPMLDYSH
FISLPLAIHPDLVEKLNHFQSSILGASASNVDNDKDENTSEGYIDEIDHAEGPSVSMKLR
VQEEESVRVKMDIKGSQPDFGIDKSIFIEPKTLHLTVLMLKLWNMDRIAKASDVLQSISS
QVNEALENRPISIQLKGLTCMKGSPARARVVYAPVLEVGGEGRLTCMKGSPARARVVYAP
VLEVGGEGRLAMNYSYLSPADFGIDKSIFIEPKTLHLTVLMLKLWNKERIAKASDVLQSI
SSQVNEALENRPISIQLKGLAHQLGPGWYMLQYWKLVEKGAWRVLAVSFGISDNYKKWNQ
RNDSLDARNIFRKYGEQEWGEYPIPEVHLSQRFKFDDSGYYHCCSSIPLPEEMQTDLIME
EEEESASPVLRCFPLLLPFQIGPPFLPLFAVQETGAVILRWHEFQGFDLTAGGAVSQPLR
TLGAQYLAWNLANVAKPPKSV
Download sequence
Identical sequences PH01000812G0040

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