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Domain assignment for PH01001575G0100 from Phyllostachys heterocyclavar. pubescens

Domain architecture


Domain assignment details

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Strong hits

Sequence:  PH01001575G0100
Domain Number 1 Region: 163-242
Classification Level Classification E-value
Superfamily Eukaryotic type KH-domain (KH-domain type I) 0.0000000000000811
Family Eukaryotic type KH-domain (KH-domain type I) 0.0018
Further Details:      
 
Domain Number 2 Region: 267-297
Classification Level Classification E-value
Superfamily CCCH zinc finger 0.00000000445
Family CCCH zinc finger 0.0016
Further Details:      
 
Domain Number 3 Region: 100-132
Classification Level Classification E-value
Superfamily CCCH zinc finger 0.0000000301
Family CCCH zinc finger 0.0023
Further Details:      
 
Domain Number 4 Region: 36-62
Classification Level Classification E-value
Superfamily CCCH zinc finger 0.0000105
Family CCCH zinc finger 0.0038
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) PH01001575G0100
Sequence length 302
Comment PH_genemodel_v1 PH01001575..53524..56339 . + . ID=PH01001575G0100;Name=zinc finger C-x8-C-x5-C-x3-H type family protein, expressed
Sequence
MEGGGRKRGKPDGANGASAGGKRARESESFQTGVGSKSKPCTKFFSTSGCPFGEGCHFLH
YFPGGYQAVAKMTNLGGPALAPPPVRMPMGPAVPDGPSTPTVKTRLCNKYNTAEGCKWGD
KCHFAHGEREIGKPMLTDSSMPPPMGPRPTGHFAPQPMPNPGMATPASFGASATAKISVD
ASLAGAIIGRGGVNTKQISRVTGAKLAIRDHESDTSLKNIELEGSFDQIKNASTLVRELI
VSISGNAPPPAKHPAGGSHRGGGPGSNFKTKLCENFTKGSCTFGDRCHFAHGENELRKSA
AA
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Identical sequences PH01001575G0100

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