SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for PH01000141G0850 from Phyllostachys heterocyclavar. pubescens

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  PH01000141G0850
Domain Number 1 Region: 144-263
Classification Level Classification E-value
Superfamily Eukaryotic type KH-domain (KH-domain type I) 3.42e-30
Family Eukaryotic type KH-domain (KH-domain type I) 0.0000312
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) PH01000141G0850
Sequence length 290
Comment PH_genemodel_v1 PH01000141..518036..524406 . + . ID=PH01000141G0850;Name=KH domain containing protein, putative, expressed
Sequence
MDERIPPPSLLQYSPSPVHSSPHHLNSLRYSASERERYLAELLAERQKLAPFVQVLPFCT
RLLNQEILRASSMPHNHNFVDPERIEHGSPLRLPGHPMNGQPMDLEGWSGMQTEHMGVLQ
ASSMGWNGAPALSGPPVVKKVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEASTQCRVY
IRGCGSVKDSVKEEKLRDKPGYEHLNDPLHVLVEAEFPADIVDARLNQAVTILEDLLKPI
DESMDYYKKQQLRELAILNGTLREESPSPHLSPSVSPFNSTGMKRAKTGR
Download sequence
Identical sequences PH01000141G0850

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]