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Domain assignment for ENSPMAP00000006960 from Petromyzon marinus 76_7.0

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSPMAP00000006960
Domain Number 1 Region: 37-64,113-388
Classification Level Classification E-value
Superfamily WD40 repeat-like 7.1e-55
Family WD40-repeat 0.00023
Further Details:      
 
Domain Number 2 Region: 388-431
Classification Level Classification E-value
Superfamily SOCS box-like 0.0000471
Family SOCS box-like 0.008
Further Details:      
 
Weak hits

Sequence:  ENSPMAP00000006960
Domain Number - Region: 32-108
Classification Level Classification E-value
Superfamily Fucose-specific lectin 0.0222
Family Fucose-specific lectin 0.028
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSPMAP00000006960   Gene: ENSPMAG00000006290   Transcript: ENSPMAT00000006991
Sequence length 433
Comment pep:known_by_projection scaffold:Pmarinus_7.0:GL477042:17900:43887:1 gene:ENSPMAG00000006290 transcript:ENSPMAT00000006991 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MASFPHAVNEDAIAPSYLVSELRPPSGPPRGLKSGCEVRAVAWSPDGTFVAWAQGPRGTV
RLLPWSPRLNNLSLSCVHGCHWPRPSGSGEVIADGDGAVVEGGDGNDVGGRTIECGETVW
SLALGSPLPGKTSRCINIEFHRFRFDDDALVLATGLASGRIKIWDVFTGKFLLYLMDHTA
IVQDLTFAPDGSLMLVSASRDKTLRVWDLKDDGNMVKVLKGHHKWVNASAFSLDASMLCS
VGAGKSVLLWEMEHFTLLRRLEGHLNDVVACEFSPDGALLATASHDTRCILWDPYTGTAV
ASFGHLFPAPSPIFAGGANYHWVRAVAFSRDGLHVASLADDGLLRFWHVGDDSAPVAVAN
VPNGQCCAFSPNGHVLLAGRQDGGVGVWAAPRDVGPLQHLCRMSLRRVSTQQVDAMADTL
PGKMHRYLTYRSS
Download sequence
Identical sequences S4RP24
ENSPMAP00000006960 ENSPMAP00000006960

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