SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for MA_74539g0010 from Picea abies

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  MA_74539g0010
Domain Number 1 Region: 54-315
Classification Level Classification E-value
Superfamily L domain-like 5.1e-60
Family Polygalacturonase inhibiting protein PGIP 0.00062
Further Details:      
 
Domain Number 2 Region: 313-598
Classification Level Classification E-value
Superfamily L domain-like 9.86e-54
Family Polygalacturonase inhibiting protein PGIP 0.042
Further Details:      
 
Domain Number 3 Region: 632-785
Classification Level Classification E-value
Superfamily L domain-like 6.24e-23
Family Polygalacturonase inhibiting protein PGIP 0.011
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) MA_74539g0010
Sequence length 808
Comment high_confidence
Sequence
MEGARTLWDTVQIPGRNRPTLMHFSDSFYKLALRLLLHAIIFSVSGGGGGGDFHSGDRQA
LLSFKQALKVPKGQLDDWKGEECSQWRGVACDSQSGRVIILNLGSMQLAGSIPDKICRLT
MLQTLDLRENNISGVIPHCIGELSSLRTLSLCGNQIAGSIPASLGSLSLLDSLYLQQNQL
AGTVPAALSALGNLEKLSLAGNRKLGGDIPGWIGKLTKLTFLSLSLNEFTGEIPPSYSKL
LNLTFWYMAGISLEGVIPDWIGNLVNLKDLHLQNNILGGEIPLSIAKLPNLVDLDLSGNN
LQGMIPEWGFPLVSLKLHSNRLSGTLPCFTGAAKSLVTLNLSNNSLTGGIPSCISSLSVL
SELNLSCNSFNMELPPTLVFSDKLLTLDLHSNNLPGRIPRRIAQTSDTRGLVLLDLSNNQ
FTGKLPAEINKLKLLQALFLSKNGLTGELPDSLGDMMYLQAIDLSYNYLSGSLPVSLVEC
FQLLEIKLRHNNISGAIHPELGALATLRILDISHNHLSGEIPLPLAGCTKLEVVDLSWNN
LEGRLPDAISKWIELRVLNLGHNYFQGPLPDWILGFESLHMLDLSSNNFSGSIPQDVHLQ
ADQEIEHTGANTGGFYSETVTVALNANQLSLYYSLHVTVSIDLSDNELSGRIPCDLNGLK
GLQYLNFSYNALTGPIPSSLGNVTSLESLDLSHNSLTGQIPVELGNLSLLMDFNLSYNAF
SGSIPQAQRLTRFPDAFLGNPGLCNDALHDCSSNLPVASGTRQMQDESFLSLSAFGISAL
ISFYLSILSLFFSQRARDYIIKPWKPLW
Download sequence
Identical sequences MA_74539g0010

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]