SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for PITA_000070150-RA from Pinus taeda

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  PITA_000070150-RA
Domain Number 1 Region: 84-240
Classification Level Classification E-value
Superfamily IpsF-like 1.19e-56
Family IpsF-like 0.00000974
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) PITA_000070150-RA
Sequence length 241
Comment protein AED:0.11 eAED:0.11 QI:65|1|1|1|1|1|4|39|241
Sequence
MAAFTTFTSLTLPKSTCHQPCQTAFCAPVWKPINFKAPGAHSISIRGPILASVLKHEVIS
EVSASTVIATETRGGSAKPAAVLPFRIGHGFDLHRLEPNLPLIIGGVNIPHDRGCDAHSD
GDVLLHCVVDAILGALSLPDIGQLFPDSDPKWKGAASSVFVKEAVRLMHEAGYELGNLDA
TLILQRPKLSPHKEAIITNLCALLGAHSSILNVKAKTHEKVDSLGENRSIAAHTVVLLMK
K
Download sequence
Identical sequences PITA_000070150-RA

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]