SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSPSIP00000004555 from Pelodiscus sinensis 76_1.0

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSPSIP00000004555
Domain Number 1 Region: 164-220
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 8.24e-24
Family Classic zinc finger, C2H2 0.0055
Further Details:      
 
Domain Number 2 Region: 107-164
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.67e-22
Family Classic zinc finger, C2H2 0.0068
Further Details:      
 
Domain Number 3 Region: 205-257
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 2.68e-21
Family Classic zinc finger, C2H2 0.0034
Further Details:      
 
Domain Number 4 Region: 51-108
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 6.74e-21
Family Classic zinc finger, C2H2 0.0059
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSPSIP00000004555   Gene: ENSPSIG00000004276   Transcript: ENSPSIT00000004580
Sequence length 325
Comment pep:novel scaffold:PelSin_1.0:JH209042.1:45041:54552:-1 gene:ENSPSIG00000004276 transcript:ENSPSIT00000004580 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MVDSASRSQSQQNGVEQIEPHGTLVGRSKEEMSSSCAEAKACKDPHRPERSFSGCLDLTS
HEKINVGKRPYACSECGKNFSQSSTLLTHQRVHTGERPYTCSECGKSFSHGSALITHRRI
HTGETPYACPECRKHFNHSSNLIKHRRIHTGETPYACSECGKRFSRRSALTTHQRTHTGE
TPYSCSECRKSFSESSDLIRHWIIHSGEKPYTCPECGKSFNHSSNLITHRRIHTGETPYT
CPECGKRFTQSSHLITHRRVHTGETLHLPRVWEKLQPQLKPDHPSANPHWGDALHLPGVR
ETLHPELPPYHPPESAHRRATLHVL
Download sequence
Identical sequences K7F945
ENSPSIP00000004555 ENSPSIP00000004555

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]