SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSPSIP00000004171 from Pelodiscus sinensis 69_1.0

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSPSIP00000004171
Domain Number 1 Region: 24-207
Classification Level Classification E-value
Superfamily vWA-like 9.06e-47
Family Integrin A (or I) domain 0.00038
Further Details:      
 
Domain Number 2 Region: 212-376
Classification Level Classification E-value
Superfamily Fibronectin type III 2.97e-21
Family Fibronectin type III 0.001
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSPSIP00000004171   Gene: ENSPSIG00000003933   Transcript: ENSPSIT00000004194
Sequence length 410
Comment pep:novel scaffold:PelSin_1.0:JH209271.1:419209:434520:-1 gene:ENSPSIG00000003933 transcript:ENSPSIT00000004194 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
AWVTSPPSPPLCLLLSGLQPFIPDSEGDLLFLLDSSGSVSYYEFSRVKEFIRDLLRPFTF
SPSDVQTSIIHISTTPTMEFPFDRYLSTGAVQQAIRDTQQLMGDTNTGKALSYAKEKFFT
DEAGARPDVPKVLVWVTDGFSTDEISQPMQLLKDMGVTVFIVSTGRGNYLQLSAAASQPP
EKHLHFVDVDDLPIITKELRDAIIDVIRAKRLRAVDITSSSFRLTWPRLLSNDIGYYVLE
YAPTDDPGRKLVKQVSGDHTSLLLSNLSPETTYEVVLIPESNVHYIPPQTTRVTTLEEEI
SPARVLISESRPHSFRVSWAPTPDSVGSYQVLYGPLPGNSAQLLEVDGTHNSTVVENLAP
NTTYLVTVTAIYKSGKEKALSAKACTQAGKRSQAPRSITSSTGLVDARDP
Download sequence
Identical sequences K7F811
ENSPSIP00000004171 ENSPSIP00000004171

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]