SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSPSIP00000005040 from Pelodiscus sinensis 69_1.0

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSPSIP00000005040
Domain Number 1 Region: 182-375
Classification Level Classification E-value
Superfamily Fibronectin type III 4.6e-18
Family Fibronectin type III 0.0028
Further Details:      
 
Domain Number 2 Region: 438-651
Classification Level Classification E-value
Superfamily Fibronectin type III 0.000000000000422
Family Fibronectin type III 0.0041
Further Details:      
 
Domain Number 3 Region: 129-176
Classification Level Classification E-value
Superfamily Elafin-like 0.00000000034
Family Elafin-like 0.0013
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSPSIP00000005040   Gene: ENSPSIG00000004699   Transcript: ENSPSIT00000005069
Sequence length 678
Comment pep:novel scaffold:PelSin_1.0:JH206256.1:2304256:2500131:-1 gene:ENSPSIG00000004699 transcript:ENSPSIT00000005069 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MVRKDPAVALTLCLWITASWGCLAAAAGVAAARKQDESFSAVSVYRARCTSRCLSLQITR
ISAFFKHFQNNGSLIWCQNHKQCSKCLEPCKESWDLKKNHCQSFCEPLFPKKNYECLTSC
EFLKYILSVKQGDCPAPEKASGFAAACVESCEADSECSGVKKCCSNGCGHTCQVPKNLYK
GVPLKPRKELRFTELQSGQLEVKWSSKFNISIEPVIYVVQRRWNYGIHPSEDDATSWQTV
AQTTDERVQLSDIRPSAAINVHGTRGFTAPSKHFRSSKDPSAPPAPTNLRIANSTTNSDG
SVTVRVIWDLPEEPDIPVHHYKVFWSWTVSSKSVIPAKKKRRKTTDGSQNYVVLEGLQPN
SNYMVELQAVTYWGQVRLKSAKVSLYFSSTQTSINKEQTSPIGKIQKGLADPLPPFQRRK
PTRLLEIGAPFYQDNQLQVKVYWKKTEDTSMSRYHVQWFPESCAHNETKGPEKATGLTYE
NYIILQDLSFSCKYKVTVQPARSKGRLKAESIFFTTPPCSALKGKSHHLHHLKKSSEITP
VLPKVLAKPENLSASFIVQEVNITGHFSWKISKANLHQPMTGFQVTWAEVTTESRQNSLP
NSIISQSQILPADHYVLTVPNLRPSTLYRLEVQVLTTGGEGPATIKSFRTPDLLPPAPHR
PHLKQHHSHHYKPPPEKY
Download sequence
Identical sequences K7FAI0
ENSPSIP00000005040 ENSPSIP00000005040

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]