SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for PYU1_T003457 from Pythium ultimum v1.7-2

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  PYU1_T003457
Domain Number 1 Region: 16-131
Classification Level Classification E-value
Superfamily Ankyrin repeat 3.11e-20
Family Ankyrin repeat 0.0012
Further Details:      
 
Domain Number 2 Region: 408-454
Classification Level Classification E-value
Superfamily RING/U-box 0.0000000000565
Family RING finger domain, C3HC4 0.013
Further Details:      
 
Weak hits

Sequence:  PYU1_T003457
Domain Number - Region: 155-281
Classification Level Classification E-value
Superfamily PH domain-like 0.00034
Family Pleckstrin-homology domain (PH domain) 0.023
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) PYU1_T003457
Sequence length 460
Comment protein Name="PYU1_T003457" Note="Similar to Mex3d: RNA-binding protein MEX3D (Mus musculus)" AED:0.0694271481942714 QI:0|1|0.8|1|1|1|5|0|460
Sequence
MGNATSWLAQTLCPEEQVLWVAAKSGDYDVLRQALARLTPATRVYLEWRDPLYGYSPLAN
ACAQGHLPCVRLLLEHGADANARDVHGNAPLHIATKNGKSDVVHALLETARVDVLAKTTT
KMQTALDIARQEYKSSESHGQKFIQCIEMIEKKLCIYSGWLYQRADNLLSMASGIAGLNS
WKKRYCMILRTAERGVVEIDLFSMKPGERRPQCPSYELVYRATDGVQESEDVTWFGRKEF
RFALNAYSKSGINRVSAPQAYDFAATTQQELVAWKTFFGSLRLGPVHQISQAFGPVGGQG
VPYALSSEDALLQEQRDMERAIHLSVEEARRRSSMPATVPIPTPSAPPLTASFLGTYGSP
QATLAPDGVEIVQPLQIGSPLATTAARASTSTASRRAENEEMGKDAGECVICFDGPQSAV
CIPCGHNAICMNCAGELMDTTRLCPVCRVQVREVIRIYRS
Download sequence
Identical sequences K3WER6
PYU1_T003457

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]