SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for PYU1_T004425 from Pythium ultimum v1.7-2

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  PYU1_T004425
Domain Number 1 Region: 176-225,254-340,375-416
Classification Level Classification E-value
Superfamily Fibronectin type III 2.62e-23
Family Fibronectin type III 0.0035
Further Details:      
 
Domain Number 2 Region: 868-964
Classification Level Classification E-value
Superfamily TPR-like 0.0000114
Family Tetratricopeptide repeat (TPR) 0.043
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) PYU1_T004425
Sequence length 1097
Comment protein Name="PYU1_T004425" Note="Similar to Myosin heavy chain, embryonic smooth muscle isoform (Fragment) (Oryctolagus cuniculus)" AED:0.0514079369794138 QI:0|1|0|1|1|1|2|0|1097
Sequence
MDVIDMQSKQAASIRACDQQFQVEKSVRQLTSDISATQLTIRRKKDELDALQTRLLRLSS
TLHDASTDKNFAKNKVRQLEAIRKQHHGLMRCTNCAKEFVPDAFANHVSTCLASNSSKRL
TVVSRVAATRALPEMKTSRSVNQIMDQAQDIEYRALSMTTTEAHEQRKLPCFVSQPPRNL
RVDGSGGKSVTHNSILLQWDPPIFTGSTPIIDYEVRFSICHFVKRMKDGESCVSRTFESL
PPQTTSRWCLQNPVTANQFWVRDLTADQVYGAFTICAITKNGKSQPSNQVELIATAAAIP
PSKPYFLCVGVVTAKTITLTWKEPMDDGGKPIDFYEICFNEAVMEDTILERSSINDKNNN
FLDVSEVVYKPRRIRTNSNVTTFTLTDLLSGKEHKNFQVRAINQTGIPGDFSDLIASIFT
IAPGNGFKLLDELQAAVNSRARVVDSQFLSGFMQRYDRDHYVRLISRFITSLHPDMEGKV
NAILSRTRITMSEGESDDEGDGADDDPIGEKLRSNTPKPQFEDLLEEEQIQERRRQFHFR
ISELKQRLKTADYNVQWCKDRRIDLVALIRAAENRTLEKQAELERAKMFTGPQMDSDVLE
NGLQRFYTKDLIFALEDEIVIEQLYIVDTKSEIVQVENYLGADERKRDAIQARLQNRKDA
LEAFETNPYGNTSDSTHQDVKVTSLARLRDGVLFRAFSAFVINRASAIEMRKKVRATLLQ
FVNYRCRMAFTHWVTVVRKVLRRSSEENKGGACGVGSIALVNAALGRDDLLLQSRELLQQ
LRQTDENLESLVWTKEQQAERQQLFTAKMDADQAHNQPSQRQDKVSPFLLEADAKMDIED
FEGAARLYDFVYSNDTWMNEMPLAMVLDLLLKLGKVNYHMQNYEQALVFLNRAAFLAVKL
GKRGEEGAVTLCMAHVNFALRSLRLSIENYEHALLCFEATGDKKGQLSCFRGLEQVHGKL
EDTEMVQANKELADEIEFALATKLSNAGQVLDHLRMRLVGAGAESFTEIMLERVGSIVPR
LRTQRIMRKLDIREEAKLVASLESLLLEKKALLAQGEVDLKRALASDTPLVDSSAIIGTN
VRYEIEDFKKTLAKLMG
Download sequence
Identical sequences K3WHI3
PYU1_T004425

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]