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Domain assignment for PYU1_T011765 from Pythium ultimum v1.7-2

Domain architecture


Domain assignment details

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Strong hits

Sequence:  PYU1_T011765
Domain Number 1 Region: 91-183
Classification Level Classification E-value
Superfamily Nucleic acid-binding proteins 5.96e-25
Family Cold shock DNA-binding domain-like 0.0000441
Further Details:      
 
Domain Number 2 Region: 185-304
Classification Level Classification E-value
Superfamily Eukaryotic type KH-domain (KH-domain type I) 5.31e-24
Family Eukaryotic type KH-domain (KH-domain type I) 0.0017
Further Details:      
 
Domain Number 3 Region: 40-90
Classification Level Classification E-value
Superfamily Ribosomal L27 protein-like 0.0000000017
Family ECR1 N-terminal domain-like 0.0036
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) PYU1_T011765
Sequence length 308
Comment protein Name="PYU1_T011765" Note="Similar to EXOSC2: Exosome complex exonuclease RRP4 (Homo sapiens)" AED:0.0361380798274002 QI:0|-1|0|1|-1|1|1|0|308
Sequence
MQIHVRRQAGADGLDVDGDVAMDLLEHKEQQLQDEQQIVVVTPGQVISTETGAFLRGHGT
YLDHQTNELIASVTGVVEKVNQLITVRPLVSRYIGEVGDIVVGRITEVANKRWKVDVNGQ
QDASLMLSSVTLPGGAQRRRTYEDQLQMRNFFVENDLISAEIQEVRYDGSLSLHTRSLRY
GKLENGQFVQVAPHLVKRMKQHMVTLPGIGVDLILGTNGYLWLSRSFTALNGGDDSSMDD
LSTGNMETRVEILMEKRQQHANTKMSVDDRKKIARVYRALLHLNEQFRLITPESIMAVYE
ALLDQEDA
Download sequence
Identical sequences K3X3G6
PYU1_T011765

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