SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for PYU1_T014129 from Pythium ultimum v1.7-2

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  PYU1_T014129
Domain Number 1 Region: 240-321,350-427
Classification Level Classification E-value
Superfamily RNA-binding domain, RBD 7.55e-16
Family Canonical RBD 0.0018
Further Details:      
 
Weak hits

Sequence:  PYU1_T014129
Domain Number - Region: 133-171
Classification Level Classification E-value
Superfamily RNA-binding domain, RBD 0.00217
Family Canonical RBD 0.0067
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) PYU1_T014129
Sequence length 433
Comment protein Name="PYU1_T014129" Note="Similar to At1g43190: Polypyrimidine tract-binding protein homolog 3 (Arabidopsis thaliana)" AED:0.342657930107527 QI:0|0|0|0.2|1|1|5|0|433
Sequence
MTTSKVLYFDQLPPHWTARDLAEALAPLAEAPQITRSVFLHKRNALYAGFHPSSHEIIPS
APIPALAEIVDLDTAVRLMETLTATPLTIDHADGTSAVVAVSYSKNQELHDRIPPPSGHG
RHRRNHADINKANRILLVTVQNPTYPITTELMHGIFKGYGAVEKIVIFVKPIGLQQELIV
KENGLRTRDFTNPDLPAASDGRDTAASPVADLDIFGQSLPAGVMPAIAVSGRDAVVSPVL
LVCSLREKVTCDNLFNLFSCYGNVVRVKKLSAKPDHALVQFLNPLAAQSALIHLRGYTLL
GKSMEISFSKYMYISNRAGSTENPLVKEYNHLPNRFTGKAAMSLGKHVYSPTKLLHLSNF
DESTAIEMLKTHLGGFHGGDHCKVKTFMSPSGHLQALAEFASVDTATNVLAQAHNSLLGA
KPLKFAFSNRSFH
Download sequence
Identical sequences K3XA80
PYU1_T014129

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]