SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for OMERI01G16290.1 from Oryza meridionalis 22

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  OMERI01G16290.1
Domain Number 1 Region: 5-53
Classification Level Classification E-value
Superfamily F-box domain 0.00000353
Family F-box domain 0.0092
Further Details:      
 
Weak hits

Sequence:  OMERI01G16290.1
Domain Number - Region: 92-231
Classification Level Classification E-value
Superfamily Calcium-dependent phosphotriesterase 0.00262
Family SGL-like 0.063
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) OMERI01G16290.1
Sequence length 388
Comment pep:novel chromosome:ALNW00000000:1:17828640:17829869:-1 gene:OMERI01G16290 transcript:OMERI01G16290.1 description:""
Sequence
MADEPTPRRPRSWSDIPADIAGLVLRLLPAHADRARFAAVCPQWRAAARQRPLPPPPPLP
LLALPDGTFYSPPYDEPFRFPGFGFAGYKATCGSRLVFPRDDGCFLVNPFTGATVTLPAL
SSVRLRPPNAVAKYDQQGTAYPVTWMHIRGSMHLHISKLILCLPNLAAAIVGDGHISQIL
DMAFYQGKLYAIDNYDEDLLVVNISQDQSTGDPQVSKIGQAIKGEPFRSVWHEFGTMDFL
ANKKLYLVESHGSLLMIRRKIWCWSKHASDTDPEASRPIVAGPNEFEVFKADFEQSRWVK
MTTLGDEQVLFLGRRCSRAMSVSQYGMSGDQIFLDDEEENLELYYYSTEITSFCVYDMRD
GQVDSPLPKASWKRCDEMRVVAWLFPQD
Download sequence
Identical sequences A0A0E0C344
OMERI01G16290.1

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]