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Domain assignment for OMERI04G23860.4 from Oryza meridionalis 22

Domain architecture


Domain assignment details

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Strong hits

Sequence:  OMERI04G23860.4
Domain Number 1 Region: 170-245
Classification Level Classification E-value
Superfamily Eukaryotic type KH-domain (KH-domain type I) 0.0000000000000501
Family Eukaryotic type KH-domain (KH-domain type I) 0.0024
Further Details:      
 
Domain Number 2 Region: 274-305
Classification Level Classification E-value
Superfamily CCCH zinc finger 0.00000000183
Family CCCH zinc finger 0.0015
Further Details:      
 
Domain Number 3 Region: 104-134
Classification Level Classification E-value
Superfamily CCCH zinc finger 0.0000000602
Family CCCH zinc finger 0.0023
Further Details:      
 
Domain Number 4 Region: 38-62
Classification Level Classification E-value
Superfamily CCCH zinc finger 0.0000445
Family CCCH zinc finger 0.0048
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) OMERI04G23860.4
Sequence length 309
Comment pep:novel chromosome:ALNW00000000:4:28753345:28756828:1 gene:OMERI04G23860 transcript:OMERI04G23860.4 description:""
Sequence
MEGAGAARKRSRPDTANGGAAGGKRSRETESFQTGLSSKSKPCTKFFSTIGCPFGEGCHF
SHFVPGGYQAVAKTLNLGNPAVPAPARAPMDHAAGGNSHPASSGKTRMCTKYNTAEGCKF
GDKCHFAHGERELGKPAYMSHESAMAPPMGGRYGGRPEPPPPAAMGPPAGNFGASATAKI
SVDASLAGGIIGKGGVNTKQICRVTGVKLSIRDHESDPNLKNIELEGNFDQIKQASNMVG
ELIATISASTPAKKPAGSAAGAAPAGRGGPGGRSNYKTKLCENFVKGTCTFGDRCHFAHG
ENEQRKGAA
Download sequence
Identical sequences I1PQM9
ORGLA04G0249800.1 OMERI04G23860.4

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