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Domain assignment for ENSSSCP00000005269 from Sus scrofa 69_10.2

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSSSCP00000005269
Domain Number 1 Region: 55-114
Classification Level Classification E-value
Superfamily TNF receptor-like 0.0000000005
Family TNF receptor-like 0.0021
Further Details:      
 
Domain Number 2 Region: 2-32
Classification Level Classification E-value
Superfamily TNF receptor-like 0.00000913
Family TNF receptor-like 0.014
Further Details:      
 
Weak hits

Sequence:  ENSSSCP00000005269
Domain Number - Region: 116-139
Classification Level Classification E-value
Superfamily TNF receptor-like 0.00133
Family TNF receptor-like 0.0033
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSSSCP00000005269   Gene: ENSSSCG00000004898   Transcript: ENSSSCT00000005404
Sequence length 568
Comment pep:known chromosome:Sscrofa10.2:1:176595777:176650046:-1 gene:ENSSSCG00000004898 transcript:ENSSSCT00000005404 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MFSKCTATSESICLPCGPDEYLDTWNEEEKCLLHKVCDTGKALVAVEPGNRTAPRRCACT
AGYHWSEDCHCCRRNAECAPGFGAQHPVQLNKDTVCKPCLAGYFSNTSSSTEKCKPWTNC
TILGETEARHGTDKSDVVCSSSLPSTKPPNVSSNTEPQTYLPSLIILFLFISVALVAAVI
FGVYYRKKGKALTANLWHWVNEACGRLSGNKQESSGNNFSCTRMEASSQREVGEGVLLLT
LEEKVFSEDMCCPDGGGACGGACAGGGLSAQGQDARVLTLVSEITGDPFRQIPTEDEYVD
RAPQTPDSILFLTQPGSTSTPPFPEPLEVGENDSLSQCFTGTESLVDSESCHFAEPAFRT
DWVPTSSEKEMEGGNGPHLAASPSSTDGCAGCRALLGRTGNPQWIPSKRTPAPVRYGHGP
PPEAADRARAGGQPLDGAEVKLPSSMRGGPGSGGPSNDQPPASGNVTGNSNSTFISSGQV
MNFKGDIIVVYVSQNSQEGPAGTGGGAGEPVGRPVQEESPPCCDSFAGLGPRFPDTCAGL
EVGPALQKRGTPGHKASRPVQEQGEAKA
Download sequence
Identical sequences ENSSSCP00000005269 ENSSSCP00000024913

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