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Domain assignment for ENSSSCP00000012437 from Sus scrofa 69_10.2

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSSSCP00000012437
Domain Number 1 Region: 603-700
Classification Level Classification E-value
Superfamily Fibronectin type III 0.0000000000000286
Family Fibronectin type III 0.0039
Further Details:      
 
Domain Number 2 Region: 281-342
Classification Level Classification E-value
Superfamily B-box zinc-binding domain 0.000000000014
Family B-box zinc-binding domain 0.0025
Further Details:      
 
Domain Number 3 Region: 143-219
Classification Level Classification E-value
Superfamily RING/U-box 0.000000144
Family RING finger domain, C3HC4 0.033
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSSSCP00000012437   Gene: ENSSSCG00000011668   Transcript: ENSSSCT00000012773
Sequence length 724
Comment pep:known_by_projection chromosome:Sscrofa10.2:13:89381755:89407394:1 gene:ENSSSCG00000011668 transcript:ENSSSCT00000012773 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
METAMCVCSPCCTWQRCCPRLCSCLCCKFLFTSERNCTCFPCPYKDERNCQCCHCTCSEN
PNCHWCCCSWANDPNCKCCCTTSGNLQCHYYESRCCRNATITFHKGRLRSIRTSSKTALR
IGSSDTQVDEVKSMPPNSNLVSHLSCPICNRLRLHSFMLPCHHSLCEKCLRHLQKHAEVT
ENFFILICPVCNRSHCMPYSQKMQLPENYLRGRLTKRYMQQHGYLKWRFDRSSGPIVCQV
CRSQRIAYKRCITCRLNLCNECLKTFHSDVAMQDHVFVDTSTEDQDEKICIHHPSSRIIE
YCRTDNELLCTFCKTSFHNGHDTVSLIDACSERAAALFSAIAKFKAVRYEIDNDLMEFNI
LKNSFKADKEVKRKEIRTGFLKLRSILQEKEKAIMEQIENLEVARQKEIEKYVYVTTMKV
NEMDGLIAYSKEALKETGQVAFLQSAKILVDQIEDGIQSTFRPDPQLRLHSLTCMSLDFA
ELSSAIHELFPTGPKKVCSSGDSLPSPYPLHSEMMIARKVTFSTHSFGNQQIYQRSSSLL
SFSGPSCEKTKGGLEVYGRAQSAAPAKPTDGLYTYWSAGVENQPVQNSSSFHNWYSFSDG
SVKTPGPIIIYQTLVYPRAAKVYWTCPTEDVDSFEMEFYELVNSPPNNVRTELCGQIRDI
MQQSLELHNLTPNTEYLFKVRAINDNGPGQWSDICKVVTPDGRGKNRAKWGLLKNIQTAL
QKRF
Download sequence
Identical sequences ENSSSCP00000012437 ENSSSCP00000012437 9823.ENSSSCP00000012437

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