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Domain assignment for ENSSSCP00000015258 from Sus scrofa 69_10.2

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSSSCP00000015258
Domain Number 1 Region: 482-572
Classification Level Classification E-value
Superfamily RNA-binding domain, RBD 2.55e-19
Family Canonical RBD 0.00000482
Further Details:      
 
Domain Number 2 Region: 391-475
Classification Level Classification E-value
Superfamily RNA-binding domain, RBD 2.47e-16
Family Canonical RBD 0.00000943
Further Details:      
 
Weak hits

Sequence:  ENSSSCP00000015258
Domain Number - Region: 290-322
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.000238
Family Classic zinc finger, C2H2 0.041
Further Details:      
 
Domain Number - Region: 803-845
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.00169
Family HkH motif-containing C2H2 finger 0.016
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSSSCP00000015258   Gene: ENSSSCG00000014343   Transcript: ENSSSCT00000015671
Sequence length 849
Comment pep:known_by_projection chromosome:Sscrofa10.2:2:147027901:147059819:1 gene:ENSSSCG00000014343 transcript:ENSSSCT00000015671 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MSKSFQQSSLGRDSQGHGRDLSAAGIGLLAAATQSLSMPASLGRMNQGTARLASLMNLGM
SSSLNQQGAHSALSSASTSSHNLQSIFNIGSRGPLPLSSQHRGDADQASNILASFGLSAR
DLDELSRYPEDKITPENLPQILLQLKRRRTEEGPTLSYGRDGRSATREPPYRVPRDDWEE
KRHFRRDSFDDRGPSLNPVLDYDHGSRSQESGYYDRMDYEDDRLRDGERCRDDSFFGETS
HNYHKFDSEYERMGRGPGPLQERSLFEKKRGAPPSSNIEDFHGLLPKGYPHLCSICDLPV
HSNKEWSQHINGASHSRRCQLLLEIYPEWNPDNDTGHTMGDPFMLQQSTNPAPGILGPPP
PSFHLGGPAVGPRGNLGAGNGNLQGPRHMQKGRVETSRVVHIMDFQRGKNLRYQLLQLVE
PFGVISNHLILNKINEAFIEMATTEDAQAAVDYYTTTPALVFGKPVRVHLSQKYKRIKKP
EGKPDQKFDQKQELGRVIHLSNLPHSGYSDSAVLKLAEPYGKIKNYILMRMKSQAFIEME
TREDAMAMVDHCLKKALWFQGRCVKVDLSEKYKKLVLRIPNRGIDLLKKDKSRKRSYSPD
GKESPSDKKSKTDGSQKTESTTEGKEQEEKSGEDGEKDTKDDQAEQEPSMLLESEDELLV
DEEEAAALLESGSSVGDETDLANLGDVASDGKKEPSDKAVKKDANASASAASKKKLKKVD
KIEELDQENEAALENGIKNEENTEPGAESAENADDPNKDTSENADGQSDENKEDYTIPDE
YRIGPYQPNVPVGIDYVIPKTGFYCKLCSLFYTNEEVAKNTHCSSLPHYQKLKKFLNKLA
EERRQKKEA
Download sequence
Identical sequences A0A0B8RVQ4 F1RGI7
ENSSSCP00000015258 XP_013850634.1.46622 XP_020940514.1.46622 XP_020940515.1.46622 XP_020940516.1.46622 XP_020940517.1.46622 XP_020940518.1.46622 ENSSSCP00000015258

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