SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSSSCP00000017605 from Sus scrofa 69_10.2

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSSSCP00000017605
Domain Number 1 Region: 180-372
Classification Level Classification E-value
Superfamily Voltage-gated potassium channels 7.2e-40
Family Voltage-gated potassium channels 0.0046
Further Details:      
 
Domain Number 2 Region: 41-145
Classification Level Classification E-value
Superfamily POZ domain 4.93e-32
Family Tetramerization domain of potassium channels 0.00000105
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSSSCP00000017605   Gene: ENSSSCG00000016621   Transcript: ENSSSCT00000018095
Sequence length 372
Comment pep:known chromosome:Sscrofa10.2:18:28125335:28126450:-1 gene:ENSSSCG00000016621 transcript:ENSSSCT00000018095 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MAAGVAAWLPFARAAAIGWMPVASGPMPAPPRQERKRTQDALIVLNVSGTRFQTWQDTLE
RYPDTLLGSSERDFFYHPETQQYFFDRDPDIFRHILNFYRTGKLHYPRHECISAYDEELA
FFGLIPEIIGDCCYEEYKDRRRENAERLQDDADTDNTGESTLPTMTARQRVWRAFENPHT
STMALVFYYVTGFFIAVSVIANVVETVPCGSSPGHIKELPCGERYAVAFFCLDTACVMIF
TVEYLLRLAAAPSRYRFVRSVMSIIDVVAILPYYIGLVMTDNEDVSGAFVTLRVFRVFRI
FKFSRHSQGLRILGYTLKSCASELGFLLFSLTMAIIIFATVMFYAEKGSSASKFTSIPAA
FWYTIVTMTTLG
Download sequence
Identical sequences D2HTU3 F1SJF4 M3W8J5
ENSSSCP00000017605 XP_002926035.1.58354 ENSAMEP00000021310 ENSSSCP00000017605 9823.ENSSSCP00000017605 ENSFCAP00000007293 ENSAMEP00000021310

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]