SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSSSCP00000013868 from Sus scrofa 69_10.2

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSSSCP00000013868
Domain Number 1 Region: 360-452
Classification Level Classification E-value
Superfamily PH domain-like 1.45e-18
Family Pleckstrin-homology domain (PH domain) 0.01
Further Details:      
 
Domain Number 2 Region: 550-638
Classification Level Classification E-value
Superfamily PH domain-like 2.21e-18
Family Third domain of FERM 0.0039
Further Details:      
 
Domain Number 3 Region: 250-301
Classification Level Classification E-value
Superfamily Second domain of FERM 0.00000000327
Family Second domain of FERM 0.0078
Further Details:      
 
Domain Number 4 Region: 463-549
Classification Level Classification E-value
Superfamily Second domain of FERM 0.0000103
Family Second domain of FERM 0.0062
Further Details:      
 
Weak hits

Sequence:  ENSSSCP00000013868
Domain Number - Region: 16-88
Classification Level Classification E-value
Superfamily Ubiquitin-like 0.039
Family Ubiquitin-related 0.07
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSSSCP00000013868   Gene: ENSSSCG00000013041   Transcript: ENSSSCT00000014254
Sequence length 663
Comment pep:known_by_projection chromosome:Sscrofa10.2:2:6953588:6976696:-1 gene:ENSSSCG00000013041 transcript:ENSSSCT00000014254 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MAGMQTATGDYIDSSWELRVFVGEEDPEAESVTLRVTGESHIGGVLLKIVEEIKRKQDWS
DHAIWWEQKRQWLLQTHWTLDKYGILADARLFFGPQHRPIILRLPNRCALRLRASFSQPL
FQAVTAICRLLSIRHPEELSLLRAPEKKEKKKKEKEKEEEVYDLTKVVLAGGVAPALFRG
MPAHFSDSAQTEACYHMLSRPQPPPDPLLLQRLPRPGSLLDKTKLHSRWLDSSRCLMQQG
IKAGDTLWLRFKYYSFFDLDPKTDPVRLTQLYEQARWDLLLEEIDCTEEEMMVFAALQYH
INKLSQSGEVDEPASTDQGLDDLDAALSNLEVKLEGSAPSDVLDSLTTIPELRDHLRIFR
PRKLTLKGYRQHWVVFKETTLSYYKSQDEAPGDPIQQLNLKGCEVVPDVNVSAQKFCIKL
LVPSPEGMSEIYLRCQDEQQYARWMAGCRLASKGRTMADSSYSSEVQAILAFLSLQRTGG
GGSGNNPQGPDASTEGLNPYGLVAPRFQRKFKAKQLTPRILEAHQNVAQLSLSEAQLRFI
QSWQSLPDFGISYVVVRFKGSRKDEILGIANNRLIRIDLAVGDVVKTWRFSNMRQWNVNW
DIRQVAIEFDEHINVAFSCVSASCRTVHEYIGGYIFLSTRERARGEELDEDLFLQLTGGH
EAF
Download sequence
Identical sequences F1RQ01
XP_003122642.2.46622 ENSSSCP00000013868 ENSSSCP00000013868

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]