SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

  Home > Genomes > Sphaeroforma arctica JP610 > SARC_03629T0

Domain assignment for SARC_03629T0 from Sphaeroforma arctica JP610

Domain architecture

Domain assignment details

(show help)
Strong hits

Sequence:  SARC_03629T0
Domain Number 1 Region: 2603-2660
Classification Level Classification E-value
Superfamily Cna protein B-type domain 0.0000000369
Family Cna protein B-type domain 0.01
Further Details:      
 
Domain Number 2 Region: 101-156
Classification Level Classification E-value
Superfamily Cna protein B-type domain 0.000000153
Family Cna protein B-type domain 0.0099
Further Details:      
 
Domain Number 3 Region: 1792-1847
Classification Level Classification E-value
Superfamily Cna protein B-type domain 0.000000589
Family Cna protein B-type domain 0.01
Further Details:      
 
Domain Number 4 Region: 1001-1077
Classification Level Classification E-value
Superfamily Hypothetical protein PA1324 0.000000654
Family Hypothetical protein PA1324 0.011
Further Details:      
 
Domain Number 5 Region: 3004-3059
Classification Level Classification E-value
Superfamily Cna protein B-type domain 0.000000863
Family Cna protein B-type domain 0.014
Further Details:      
 
Domain Number 6 Region: 4143-4209
Classification Level Classification E-value
Superfamily Carboxypeptidase regulatory domain-like 0.000000942
Family Carboxypeptidase regulatory domain 0.024
Further Details:      
 
Domain Number 7 Region: 1296-1353
Classification Level Classification E-value
Superfamily Carboxypeptidase regulatory domain-like 0.00000116
Family Carboxypeptidase regulatory domain 0.03
Further Details:      
 
Domain Number 8 Region: 927-989
Classification Level Classification E-value
Superfamily Cna protein B-type domain 0.00000235
Family Cna protein B-type domain 0.018
Further Details:      
 
Domain Number 9 Region: 3194-3270
Classification Level Classification E-value
Superfamily Hypothetical protein PA1324 0.00000353
Family Hypothetical protein PA1324 0.013
Further Details:      
 
Domain Number 10 Region: 582-662
Classification Level Classification E-value
Superfamily Hypothetical protein PA1324 0.00000432
Family Hypothetical protein PA1324 0.022
Further Details:      
 
Domain Number 11 Region: 1390-1444
Classification Level Classification E-value
Superfamily Cna protein B-type domain 0.00000589
Family Cna protein B-type domain 0.013
Further Details:      
 
Domain Number 12 Region: 2196-2250
Classification Level Classification E-value
Superfamily Cna protein B-type domain 0.00000785
Family Cna protein B-type domain 0.0073
Further Details:      
 
Domain Number 13 Region: 1103-1179
Classification Level Classification E-value
Superfamily Hypothetical protein PA1324 0.00000863
Family Hypothetical protein PA1324 0.021
Further Details:      
 
Domain Number 14 Region: 4040-4086
Classification Level Classification E-value
Superfamily Carboxypeptidase regulatory domain-like 0.0000153
Family Carboxypeptidase regulatory domain 0.035
Further Details:      
 
Domain Number 15 Region: 1982-2055
Classification Level Classification E-value
Superfamily Hypothetical protein PA1324 0.0000183
Family Hypothetical protein PA1324 0.0067
Further Details:      
 
Domain Number 16 Region: 2300-2358
Classification Level Classification E-value
Superfamily Cna protein B-type domain 0.0000224
Family Cna protein B-type domain 0.012
Further Details:      
 
Domain Number 17 Region: 1700-1756
Classification Level Classification E-value
Superfamily Cna protein B-type domain 0.0000243
Family Cna protein B-type domain 0.011
Further Details:      
 
Domain Number 18 Region: 2782-2867
Classification Level Classification E-value
Superfamily Hypothetical protein PA1324 0.0000366
Family Hypothetical protein PA1324 0.0093
Further Details:      
 
Domain Number 19 Region: 2683-2760
Classification Level Classification E-value
Superfamily Hypothetical protein PA1324 0.0000549
Family Hypothetical protein PA1324 0.018
Further Details:      
 
Weak hits

Sequence:  SARC_03629T0
Domain Number - Region: 3693-3746
Classification Level Classification E-value
Superfamily Cna protein B-type domain 0.00011
Family Cna protein B-type domain 0.016
Further Details:      
 
Domain Number - Region: 2390-2466
Classification Level Classification E-value
Superfamily Hypothetical protein PA1324 0.000122
Family Hypothetical protein PA1324 0.011
Further Details:      
 
Domain Number - Region: 3592-3644
Classification Level Classification E-value
Superfamily Cna protein B-type domain 0.000141
Family Cna protein B-type domain 0.012
Further Details:      
 
Domain Number - Region: 807-867
Classification Level Classification E-value
Superfamily Cna protein B-type domain 0.0002
Family Cna protein B-type domain 0.014
Further Details:      
 
Domain Number - Region: 2499-2576
Classification Level Classification E-value
Superfamily Hypothetical protein PA1324 0.000209
Family Hypothetical protein PA1324 0.017
Further Details:      
 
Domain Number - Region: 514-571
Classification Level Classification E-value
Superfamily Cna protein B-type domain 0.00022
Family Cna protein B-type domain 0.014
Further Details:      
 
Domain Number - Region: 2911-2965
Classification Level Classification E-value
Superfamily Cna protein B-type domain 0.00022
Family Cna protein B-type domain 0.021
Further Details:      
 
Domain Number - Region: 3404-3454
Classification Level Classification E-value
Superfamily Starch-binding domain-like 0.000255
Family Rhamnogalacturonase B, RhgB, middle domain 0.041
Further Details:      
 
Domain Number - Region: 3496-3543
Classification Level Classification E-value
Superfamily Starch-binding domain-like 0.000314
Family Rhamnogalacturonase B, RhgB, middle domain 0.039
Further Details:      
 
Domain Number - Region: 307-360
Classification Level Classification E-value
Superfamily Cna protein B-type domain 0.00051
Family Cna protein B-type domain 0.015
Further Details:      
 
Domain Number - Region: 2104-2159
Classification Level Classification E-value
Superfamily Carboxypeptidase regulatory domain-like 0.000549
Family Carboxypeptidase regulatory domain 0.026
Further Details:      
 
Domain Number - Region: 1479-1566
Classification Level Classification E-value
Superfamily Hypothetical protein PA1324 0.000615
Family Hypothetical protein PA1324 0.023
Further Details:      
 
Domain Number - Region: 707-761
Classification Level Classification E-value
Superfamily Cna protein B-type domain 0.000628
Family Cna protein B-type domain 0.0089
Further Details:      
 
Domain Number - Region: 1601-1651
Classification Level Classification E-value
Superfamily Cna protein B-type domain 0.000706
Family Cna protein B-type domain 0.017
Further Details:      
 
Domain Number - Region: 3103-3163
Classification Level Classification E-value
Superfamily Starch-binding domain-like 0.000804
Family Rhamnogalacturonase B, RhgB, middle domain 0.027
Further Details:      
 
Domain Number - Region: 1895-1953
Classification Level Classification E-value
Superfamily Cna protein B-type domain 0.00141
Family Cna protein B-type domain 0.017
Further Details:      
 
Domain Number - Region: 3908-3953
Classification Level Classification E-value
Superfamily Cna protein B-type domain 0.00243
Family Cna protein B-type domain 0.018
Further Details:      
 
Domain Number - Region: 3315-3372
Classification Level Classification E-value
Superfamily Carboxypeptidase regulatory domain-like 0.00322
Family Pre-dockerin domain 0.084
Further Details:      
 
Domain Number - Region: 205-261
Classification Level Classification E-value
Superfamily Carboxypeptidase regulatory domain-like 0.0137
Family Carboxypeptidase regulatory domain 0.068
Further Details:      
 
Domain Number - Region: 3778-3864
Classification Level Classification E-value
Superfamily Hypothetical protein PA1324 0.0222
Family Hypothetical protein PA1324 0.016
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) SARC_03629T0
Sequence length 4236
Comment | SARC_03629 | Sphaeroforma arctica JP610 hypothetical protein (4237 aa)
Sequence 
MRAFLALMLIAMLCLPQTSAAIQSSCCKRKRNNMIISARIDGPRTPGGVSVSDVESIPTP
TPAESASPIVYPDDSSSASPSVALSASPSATPSKSQILGQISGSLIDLGSGLGIPNANVI
LVDVATNEAIGTVATDDNGLYVFLDLPVGEYNVISPADVKALPIVSGPLDSNGQDSDGKL
FEHVVTINAEEPTVSNVDFKYLKDATITGTVTLSNNTQNDALVGATVSAVCLDDETITME
PVNTDINGMYSFLGVPDCNWEIVVPDEFNGFPIHSDDSTEPGEKKTVLIAPEDRVGIANF
EYIPFGTISGYVFNRDDNTTVSGVVVQASCNGLSSERTTDSEGFYEFTRLNDCEYAIVAP
PSINTGVFEGTFVEGPGDGDLSHPVIVDSDSRGEENVNYYYETAPKGALSGTLRDFITRE
GIAGQTVEIACIDGPNRDVSRINTDSEGNYKFTALDFCTYSVQAPGDTGDGREIVVGPED
GVDPKESTTVPLTKAVPTKTQVNFEYSLPEEPASITGTVTLLPGNEPITSVEVTATCTSD
VSITMAPVTTDANGIYTFTDVVDCAWTISVPTEVDNVPVSSPSDVTAVIDPANRDIEVNF
DFQPNGVISGRTLDDFDDSAIPDMLVTLVCTEDGSMQSQKTNADGEYLFTELKDCNYVVS
VPSSSEAVGPIVSGHGDTESLYEGTVVIDDDTKLAEDVSFKYLSQGTIAGKLRDLVSTTG
IAGELVTVTCESRGITKETYTNALGEYRFDNLGYCDYVVKAPEAVAAVGPVFSGFDGSDP
TSEANVPIDIETPSVGEVNFEYTAVGSISGVVFVDEEVADNGQPGVDVVLTCKENPEIQF
TTSTADRGVYTFVDIPLCTYTVEVPTAVDGKPIESGYDEDDTPELADVTVSTETPAVTNV
SFLYKLAPSPSATGSPSPSASRYIPGTVAGVVTIEGTEIGVPGVVVTATCAEDGMEYTAT
SGNDGSYTLGNLPDCVYTVSVPATEGNGWPVVSTGVTEVEISPENRTEEVKFEYTPLGSI
SGATLSDFDKTTPIEGVLVELTCEGAETQTATSDALGKYSFTELPPCTYTVTVPTSVTNG
GDLVSGPSDSDTSATEVHEEVISGNDVIDVDFFYLPEGTIAGNLRDHVTEEPLAGETVTM
TCLENPDITFTNVTDAAGNYEFTNLVACSYRVVAPETSTSGPIFAGPEDRTEDNKEFSTV
VYISPDNPEEGDVDFTYTEVGSVSGSIFEDSVAPENGDIPLCTYAIAVPEEVSVADGVKP
INEGYDSDVTKAEADVTIDLVQAVVTDVDFIYKVPAVISGTVTGYEDGEGIENVTVTVTC
STDMTIMYEAITDADGNYTIDENMEDCNYIVTVPETFNGEPIEGRSETTISITPTDRTGE
ATFTYVPLGTISGHTLNDFDQTPLANVVVTLSCNDVVEETSTDASGFYIFEDLKNCDYVV
AAPASVSSAEFEGIIVIGPADDDGKKREHTVGINSDYVEEVNVDFKYLPQGTISGNLRDF
ASTDGIANQTVTLTCSDPVVSTSTQTDAAGNYEFLDLGYCDYTVAAPTSVDNVGDIYDGP
TDTDDVLSSTTVEISFEDPSAGEVDFTYSEVGTISGTIYEDFVDANNGAGEVTVTIQCTD
ANNFTMISVTGADGAYAFNDIPLCEYVISVPDEVSATDGSKPINVGYDADDTMTEADVTI
SLDVPEVTGVDFVYKVPAVVSGIVTGYEDGAGIENVTVTLTCSTDMTIVYEAITDADGRY
TIDEDMENCDYTVTVPETFNGEPIKGPSETTVSITPTVRTGEADFVYVPLATISGQVVND
FDQSPLADVVVALNCDDVEVNSTTTDGSGNYVFEDLVDCAYTVTAPLSVSQSDFAGIITD
GPVDEDGSVREHDVVITSDNLNVEDIDFAYLPQGSISGTLQNFVTGEGIANQDVVVTCDE
TTPAITRTETTDADGRYEFTGLGYCNFTLVAPVSVGPDGVFEGPEDTDGIVSSTSVDVTF
EDPTEVGVDFTYAAVGSISGGIYEDSIAPTNGVEAVVVTLVCTEMDNYTLTSTTDANGAY
DFSDIPLCLYNISVPGDVSVTGGVKPINSGYDIDDTLTEADISFDLEESIVNDVDFIYKV
PAVISGNVTAYLDGEGIENVTVTATCAEDMSIVYDTITDSSGAYVIDQNMVDCTYIVTVP
ETYNDEVIKGPKNVSVSILPDVRSGEADFLYIPLGSISGHTFNDFDQTPLANVNLSLICN
GVEVASATTNGSGYYIFEDIVDCSYTVAAPPSVSLDAFEGVIVNGPIDEDGKEREHDVIV
ISDDLHEVNVDFKYLPQGTIAGNLRDYVSNAPIADQTVTLTCSDPEISMSIQTDADGMYE
FQDLGYCDYTIVAPASVGNVGDIYEGPTDTDEVLWSTIVPITFEDPSEGEVDFTYTEVGS
ITGTLYEDFVDADNGVDATTVTLQCTDVNDFIITTETDANGEYSFLDIPLCAYVISVPDQ
ITGSGESNPIALIAEGYDSDDTKAEADVTIDLVQQDVADVDFLYIVPAVISGNIVGYEDG
EGIGNVPVTATCVEDPSIVYSVVTESNGDYIFTGDVENCNYTVTVPETFLGEPIKSSSEG
TVSITPSDRTGDVDYVYIPLGIISGNVLDDFDQSPLANVDLVLSCDGVVVNTTTTDADGY
YIFDDLLDCAYTVTAPQDINITDYEAVMTTGPTDEDGILWQHDVEIYEDNLFVDVDFAYT
KQGSISGTLLNYVSGDGIAGQDVVLTCADSSPVLFRTVTTDADGFYNFTGLGFCDFTIVA
PAIVDSDGAIFDGPIDTDEVLYSTTVELTPSNLSENEVDYLYTAVGSISGSVFENNVDPT
SGVAGVPITLTCTESDNITYTIESDENGDYSFDNVPVCAYIVSIPQVLNGTDGECPCPTL
NNTELQIPVVLTVTENEVTDVDFLYTLPAVISGTILGHEDGVGIEGVPVTATCAEDPSNV
IVVYTDANGNYSMNDVADCTYFINVPEEFEGEPILGQNMTYVSITTIDRTAEEDFIYFPT
TGRVSGHILSDFDQSPIADVTVVSYSNCDGTVTNTTTDSEGYYAFENLELAECTYTITAL
PAIRSSTFGGAISTGPIDADSIITNHDVTISSEDRAGDDIDFLYTPEGTISGNLQDYVTS
DGIANQNVTLTCAESGVSKWTQTDADGNFLFVNLGYCDFTVVVPETVPYGGGVYSGPEDG
DGDVSSTTVPVTFANQSVKDVNFKYGELGSISGVIYEDSAAEGNGVGGVTVTLVCTDAID
VKLTTVTDANGEYNFDDILLCPYTINVPEEVSATGGLKPIFDGYDSDLTLIEASVPISVD
ERDLTNVDFVYKVPAVISGVVAGETGSLSGVPVSVTCAETPSVVYDVVTDVTGSYFINDV
PDCTYSVTIQEVFEGQVVQTNIDTVSITSAVRTAESSFLYTLIPPAVISGTVTGATGVGI
AGTTVTATCLNDTSIVYSTVTDATGAYNIANSIEDCTYSVSVPETINGESITSLSEEIVT
ITATARTGIAEYVYGPPAVISGMVTGKDGAGIAGTTVTATCVNDTSIIYTTVTDATGAYS
IADSIKDCTYLVSVPETFNGEPISSVSGEFVSITSTVRTGVADYVYGPRGIISGYTLNDY
DQSALASVPVTLTCNGVILMTVSDATGYYMFDDLYDCDYLVTVPPTVTTSAFNGIVVGGT
VLNGSAEQQSVIIDINNAIEENVDFKYLHQNAIAGSLKDAVTGAAIANQTVTLTCADPSI
EETTVTDANGNYEFNELAFCIYSVVAPSSVDSVGAIYGGPIDTDNLLSSTEVIISMASQS
VGEVDFEYGSTGSISGYVREEDATGAIVGGVENVPVTATCQENPLLTFEVPATGVDGAYT
FPSLPICTYNISVPSNVTDPADSTNILQIINGATDGGDAEATTSVILSVLENIQTDVDFG
YQSAGECISGIVSAIDSDTQLGGETIKITCDDGFTQTTVTNDLGVYSFNDVPPTAVCEIT
FADEPNTVEIDFKDSSAECIAPAPSPTPTASPSPADLAPVGTSTTPSPVQSPSQSPASSP
AASPTASPAAEGESAAGECVSGTVSDVDTDEPLPNIPITVLCTDGFTQTVTTDELGEYAF
NNVPAASSCDITIDDSASLVAFVVGDDTTAECIATESSPSPTPSVNEEPSPTPTASPAAG
DCVSGTVTDVVTDEPLPNVLVTMLCVDGYTQTVTTDELGEYVFDAVPSVSSCDVTIADDS
ASPVGFVLEDDSLQCIASSASPDPVTSPAAATVARR
Download sequence
Identical sequences A0A0L0G537
XP_014158049.1.97753 SARC_03629T0

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

Please send feedback, comments or questions to superfamily@cs.bris.ac.uk or use the feedback form.

© Copyright 2013 The SUPERFAMILY authors and Julian Gough.