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  Home > Genomes > Saccoglossus kowalevskii v3.0 > Sakowv30008311m

Domain assignment for Sakowv30008311m from Saccoglossus kowalevskii v3.0

Domain architecture

Domain assignment details

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Strong hits

Sequence:  Sakowv30008311m
Domain Number 1 Region: 492-715,754-808,847-902
Classification Level Classification E-value
Superfamily Calponin-homology domain, CH-domain 1.04e-46
Family Calponin-homology domain, CH-domain 0.0014
Further Details:      
 
Domain Number 2 Region: 2749-2854
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 0.000000000513
Family Motor proteins 0.025
Further Details:      
 
Domain Number 3 Region: 2864-2964
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 0.0000000104
Family Motor proteins 0.023
Further Details:      
 
Domain Number 4 Region: 2379-2474
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 0.0000000292
Family Motor proteins 0.028
Further Details:      
 
Domain Number 5 Region: 1758-1853
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 0.0000000345
Family Motor proteins 0.028
Further Details:      
 
Domain Number 6 Region: 1054-1137
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 0.0000000558
Family Motor proteins 0.018
Further Details:      
 
Domain Number 7 Region: 1233-1327
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 0.0000000637
Family Motor proteins 0.027
Further Details:      
 
Domain Number 8 Region: 2297-2379
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 0.000000112
Family Motor proteins 0.038
Further Details:      
 
Domain Number 9 Region: 1676-1758
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 0.000000382
Family Motor proteins 0.038
Further Details:      
 
Domain Number 10 Region: 2644-2737
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 0.000000637
Family Motor proteins 0.028
Further Details:      
 
Domain Number 11 Region: 2118-2211
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 0.000000664
Family Motor proteins 0.025
Further Details:      
 
Domain Number 12 Region: 2560-2642
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 0.00000143
Family Motor proteins 0.072
Further Details:      
 
Domain Number 13 Region: 2013-2116
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 0.00000195
Family Motor proteins 0.038
Further Details:      
 
Domain Number 14 Region: 1939-2021
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 0.00000637
Family Motor proteins 0.024
Further Details:      
 
Domain Number 15 Region: 1500-1590
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 0.0000138
Family Motor proteins 0.024
Further Details:      
 
Domain Number 16 Region: 1125-1232
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 0.0000345
Family Motor proteins 0.044
Further Details:      
 
Domain Number 17 Region: 960-1040
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 0.0000504
Family Motor proteins 0.052
Further Details:      
 
Domain Number 18 Region: 1589-1682
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 0.0000637
Family Motor proteins 0.028
Further Details:      
 
Domain Number 19 Region: 2208-2302
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 0.0000743
Family Motor proteins 0.028
Further Details:      
 
Domain Number 20 Region: 903-981
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 0.0000903
Family Motor proteins 0.062
Further Details:      
 
Weak hits

Sequence:  Sakowv30008311m
Domain Number - Region: 2471-2564
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 0.000117
Family Motor proteins 0.028
Further Details:      
 
Domain Number - Region: 1326-1417
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 0.000425
Family Motor proteins 0.026
Further Details:      
 
Domain Number - Region: 1851-1943
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 0.000451
Family Motor proteins 0.028
Further Details:      
 
Domain Number - Region: 1417-1495
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 0.000903
Family Motor proteins 0.046
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Sakowv30008311m
Sequence length 3200
Sequence 
MLSSSVAMEPDDQSLISDACTVLDQSRRLLSVSAMITEPSGESKLMSQSMDQGPCVKNLS
PISAFLPEPLPLTCPLTTESEQVVSTSINSLSKSAFITGPFDESISRMTAEPRRLLSGTI
TKPSGETRLLSTSITETPKESTTVTLDTRHLSSASATITKPCGESKVLSTTITKEPQEVI
SRSGQATKQLFLTPREPCNETQTHFPGPPVIVETENRSRRLIQAQIVTTEPCGKLTLTPR
KSSTRSSAENNVPSVDLRRLSSASATITKPCGEFRIVSKTESQKAANGQSFTNENLQHVE
ENDESMLTPMGDLDYSQINNTIDSCLDTYSRTSQKRTTQGKQQEPKRARVESYRDKLNDK
KCSKPPTAGKKRLGSTSSVKGLAMSKLSLQKSRSKSISSRPMMYASQNMYYDEKWMKKQE
LGFTRWLNFILTPDELDCPKDPSCKMNRVDAGKILCMDTKDITLAPTKEELSLKSYTATR
RLNRLRRSACMLFESESIVRVVHKIEEEIESLRLLVRADKHINKDYGYEEALAKFTLKKF
LLLVLFLDRAKLTKLIDHDPCLFCKDAEFKSSRNLLLIFSRDFLSGEGDVTRHLGYLGYT
ITATQTSLDEFDYAVSNIAVDLRCGIRLTRIMGLLTHNWKLLSQLRTPAISRLQKIHNVG
VCLKAMKEVGIDIESGGLSSKDIIDGHREKTLELLWRLVFHFQISINLNENQIQEEVTFL
KKNLRTRRQLQLLLLNETHVVSDEKRLSEPGLYYKSHKLSLLLEWSKAVCAYYNLKVENF
TVSFSDGRVLCCLVHHYHPSLLPWNGIRHDTTQSQFQIEETESDGEEFRNSTWCDTFSPT
TGKPTQLDELLTNEKHNFKMVYDAVGHLGGVPVMIKSSEMSHTIPNEKVVITFLSYLCNR
LLDLCQEGRAARVIQSVWREYKLRKTVKEQKLKIAAAIIIQRHFRDYCQRKREAELHCVA
IRVQSIWRGNLARKKVKEIRKQQLMIKQEQAAVIIQSFVRRFLAQRLRSRVMSAVVRIQS
TLRGHIVREHIQKLREAVKRVESVYFAKKVGKTVRQEFLRMRFAAITLQSSYRAVKARKL
VRELKAAVKIQSAYRCYVARKSYKTLKKAVIIVQSNMKMSILRRKYKKILKSTLVIQARY
RAWSVAKQQQHEYKKMKMACITIQSVFRGHQARLLSRQHRAARLIQCVFRMHRLSRKYQK
MRSSAIVLQAAFKSHLSHKKFQTLKKSAIKIQQKWKATLLARRQKKSYLKLKGTVILAQS
LYRARLARIYVQRIQAAVKIQSAYRGYVAFKNYKDFRKAVITIQSNIKMSIQRRKYKQIL
KSTKIIQEHYRAHSRRIEAMKKYQEIKTSCVTIQTYCRRYQARKTYRELRRVTIQMQALI
RRKQAMKKYKKTKQAALVVQRRFRANLLCQQEQKCFHVVKTSCITIQSYYRGFKARQLAR
QHRAARLIQSVFRMHRLSRKYQQMRSSAIVLQAAFKSHLSCKKFQTLKKSAIKIQQKWKS
TLLARRQRKLYLKLKGTVILAQSLYRARLARIYVLRIQASVKIQSAYRGYVAFKNYKDFR
KAVIAIQSNVKMSIQRRKYKQILKSTKIIQEHYRAHSRRIEAMKKYQEIKTSCVTIQTYC
RRYQARKIYRELRRVTIQMQALVRRKQAMKKYKKTKQAALVVQRCFRANLLCKQEQKCFH
VVKTSCITIQSYYRGFKARLLSRQHRAARLIQSVFRMHRLRTKYQKMRSSAIVLQAAFKS
HLSHKKFQTLKKSAIKIQQKWKATLLARRQKKSYLKLKGTVILAQSLYRARLARIYVQRI
QAAVKIQSAYRGYVAFKNYKDFRKAVITIQSNVKMSIQRRKYKQILKSTKIIQEHYRAHS
RRIEAMKKYQEIKTSCVTIQTYCRRYQARKIYRELRRVTIQMQALVRRKQAMKTYKRTKQ
AAIVVQRRFRANLLCQQEQKCFHVVKTSCITIQSYYRGFKARQLARQHRSATIIKSFIKM
CLIRKEFLKIKCAAIKIQANIRRVISEVKYKKLKQATMVIQTRYRAWSVAKQQQCEYKKM
KMACISIQSIFRGHQARLLSRQHRAARLIQSVFRMQRLRTKYQKMRSSAIVLQAAFKCHL
GCKKFQMLKKSAIKIQQKWKSTLLARRQRKSYLKLKGTVILAQSLYRARLARIYVQRIQA
SVKIQSAYRGYVAFKNYKDFRKAVITIQSNVKMSIQKRKYKQILKSTMIIQEHYRAHSRR
IEAMKKYQEIKTSCVTIQTYCRRYQARKTYRELRRVTIQMQALVRRKQAMKKYKKTKQAA
LVVQRCFRANLLCKQEQKCFHVVKTSCITIQSYYRGFKARLLSRQHRAARLIQSVFRMHR
LRTKYQKMRSSAIVLQAAFKSHLSHKKFQTLKKSAIKIQQKWKATLLARRQKKSYLKLKG
TVILAQSLYRARLARIYVQRIQAAVKIQSAYRGYVAFKNYKDFRKAVITIQSNVKMSIQR
RKYKQILKSTKIIQEHYRAHSHRNEAMKKYQEIKTSCVTIQTYCRRYQARKTYRELRRVT
IQMQALVRRKQAMKTYKRTKQAAIVVQRRFRANLLCQQEQKCFHVVKTSCITIQSYYRGF
KARQLAWQHRSATIIKSFIKMCSVRSKFLKQKSAAIKIQATVKGYIAKKSYKKIIHAAVV
IQVRYTAMIRARRIRCEYIRLKDAVVKMQSLHRGNTTRTYVKKIKAAIKIQSSYRRYRLF
QKYRRFKQSAIIIQSSFRRYQNVQKYQKLKTAVVRIQQYYMAYRMKKKMEEKFKLMKKSA
IVLQSAVRRLQCRRRFKLMKTSCVLIQSRVRGYLVRKHYLEKRNHAIVIQSYVRSWLAWK
PYKVRIQQQHSAIMIQKQIRGYWVRRNLKALREAEKARLMQFSAAVYLHMCAIKIQRAYR
NARTRKLAKQQLNSIITLQRCFRKKIERRQQEKRLRSVTVIQSYVRMYLAKKYADKRRQS
ITLLQAMWRGRLLRSQLKSKKIIRIRRNLTAANLKAKEEDKLSNRTTSALDYLKKIKQMS
DLLSALEHLEVATRLSAVCCERMATNNGIQTIYELLNGFNRSLPHMQAISRSISILVNLA
KYEATVSAVYYVRDKINSINIIMEQIQNFREKGCSIFTKACLLLSILGQHEHIREEILAM
PKFTDKIKSLYTLTMRKRKRNVEFERMKSLNSSMFNSFMVAPSYNLNVKPAWNLSTNRMK
ETEDSLEAIKSVARVFQIQI
Download sequence
Identical sequences Sakowv30008311m

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.