SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for Sakowv30026729m from Saccoglossus kowalevskii v3.0

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  Sakowv30026729m
Domain Number 1 Region: 30-56,217-393
Classification Level Classification E-value
Superfamily Nuclear receptor ligand-binding domain 8.78e-48
Family Nuclear receptor ligand-binding domain 0.000058
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Sakowv30026729m
Sequence length 394
Sequence
GFFRRSIQQKIQYKPCIKLGQCPILRVNRNRCQACRLRKCLDVGMSRDAVRFGRVPKKEK
AKIMAEIERIVAERQQQDSPVDLDAKGGLLIGMEQRMTVKRKSDEMETTSLQQSIQVPQQ
FEQRTVLQRENPQLLLHHETMDSQLPPPQITHKKCRLSPPQLPSNQTPTFTTEKRASACV
KPMATKYNFQINVDKQASFVNTITAAHIETSLTCPDGSHGDSKHPPLNGNIKNRPFVLCP
LVSNGIVADPTNSAADIWETFTDRFTLAIKKVVEFAKKIPGYSELNPEDQVTLLKAGCFE
VLLLRLWRLFDVEKRTLTFLSGQQLTQDELHKLGLGRLLDNMFDFASLLNKLGLLDAEVA
LFTAAVLVSSDRSGLNNPKAISQLQEKIVHGLKV
Download sequence
Identical sequences Sakowv30026729m

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]