SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain assignment for Sakowv30027213m from Saccoglossus kowalevskii v3.0

Domain architecture


Domain assignment details

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Strong hits

Sequence:  Sakowv30027213m
Domain Number 1 Region: 208-222,369-618
Classification Level Classification E-value
Superfamily Nuclear receptor ligand-binding domain 3.8e-60
Family Nuclear receptor ligand-binding domain 0.0000473
Further Details:      
 
Domain Number 2 Region: 140-221
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 1.12e-28
Family Nuclear receptor 0.0000751
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Sakowv30027213m
Sequence length 630
Sequence
MEGTQVQTIETHVVQQQQQQQQQQQQQQHQQQQQAMDTSQVVHQHHQLHPSTVTVTTVGS
NVETTTSELSKEMQTAEGLARLRHEEVITKIIQVPHVQVLQGGHAGQMQHVTLQVPQIAQ
IQQVHPIQMSPDKVVSKPMDPCVVCGDKASGRHYGVVSCEGCKGFFKRSIRKQLCYTCRG
SKDCQVTKHHRNRCQFCRLQKCLAMGMKAESVQCERTPIKSNRDRTSGNCAASTDKIYIR
KDLRSPLAATPTFVGVEKEKQHIGLFDQGMLINIQGGSPSVEASTANTDLSTLANVVTTL
ANMSKNKEGTSQDGAGDSSQVANGETGTTEIQASAEAVNQISKAFDTLAKALNPQGDATE
TANTVEVTTSDSANGSGQGDGSDQSLPLVELEGPLLSETHFQFKLTTPSPMPQYLNVHYI
CESASRLLFLSMHWARSIPAFQALGQESHTTIVQKCWSELFTLGLAECSQAMALSAILTA
IVNHLQTSVQQDKLSADRVKVVMEHIWKLQELVNSISKLQVDSSEFAYLKAITLFSTDHP
GLVNPRQLEKFQEKAVQELQEYVTRAYPASPDRFAKLLLRLPALRLLTPSIMEELFFAGL
IGNVQIDSIIPYILRMETADYNTQIAVQPQ
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Identical sequences Sakowv30027213m

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