SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for Sakowv30030920m from Saccoglossus kowalevskii v3.0

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  Sakowv30030920m
Domain Number 1 Region: 33-290
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 2.04e-33
Family ABC transporter ATPase domain-like 0.037
Further Details:      
 
Domain Number 2 Region: 762-802,845-1026
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 3.49e-22
Family ABC transporter ATPase domain-like 0.0069
Further Details:      
 
Weak hits

Sequence:  Sakowv30030920m
Domain Number - Region: 274-448
Classification Level Classification E-value
Superfamily Methyl-accepting chemotaxis protein (MCP) signaling domain 0.00217
Family Methyl-accepting chemotaxis protein (MCP) signaling domain 0.014
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Sakowv30030920m
Sequence length 1085
Sequence
MATATKRRKVSAGTKMTKSLAVAKSEDHVTGAIVRVKMQNFMIYDDCVFKPGPYLNVLIG
PNGTGKSTIVCAICLGLGGKTGLLGRSKEVGEFVKYGRSQALLEVELSNPAGNTVIRREI
VRQGNASTWYVNKVRTTYREVEETVANHNIQLANLCQFLPQDKVVEFAKMSKQELLESTE
KSVGQPELHDYHQTLKDCRRKEKELILGHKEESEILEKLRQKNIRLEADVQRFEDRQRHE
ERIESLEKKRPWVEYDLSRQRYIDLKKKKEELGKEFNEAKKKNAPMQKKLLAINTKIATL
DKQLKEKSQEIAGLAKQANHKHDALKKLTDDLLQVQEDLNEKKEEEAKKIKKINDWKKQL
EAWQRELTEIGDDDNVRPELENINAQHRDINMKMRRIDTEMNILAKDRSDFKKAIKSHKD
EIQKLNDLKDQRMRALQKRHRDTYNAVQWLRANKDRFKATIHEPMILTIDMHNREYAKYV
ETHVPDNDLRAFVCENAEDQDAFMREIRDTQHLRVNAVKSPMQDLESFRPQQPIEQLRRW
GFTTYLKDLFEAPEAVMAYLCKQHRVHEVPIGTPYTQEHIADVIASSGLRRFYTADYMYI
IRQSRYGNKATSSSSSRINNAQLLYVSIDPTQKRELEQQLREAETRLHDGEERYKELAKM
RQELAEQDNSLREKKKQLQNRRNRRQTVLQNIQAKKDSIARNEREALNIEHEEMKTNQKI
QKINERKVVLVIDLKDLIQKCMSSNKDKVKMSMSLSLAISGRTTFEEQIRESSQHLQTIE
MEYNRVSEQRKATVQEAKRLMDVAKRATGTAHDEELSPALREAFSQFPSTLQEIDNMIHH
ERTTAASMYETDPRIVEEYRQRKQEITNLAAQVEKKKVMLEKHQQEIADIKVKWLTPLQE
LISRISDRFAYFFKCMGCAGEVDLYKGENEDDFDKYGIRIRVKFRKNESLRELTSYYQSG
GERSVSTILYMMALQELNRCPFRVVDEINQGMDHNNERKVFELVVQTACRDSTSQYFLVT
PKVTVALHSFIYTPVKSFCGYSVCLSVCLSVCLYVCMFVCLYACMHACLPACMHMILSST
DISLV
Download sequence
Identical sequences Sakowv30030920m

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]