SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for Sakowv30038946m from Saccoglossus kowalevskii v3.0

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  Sakowv30038946m
Domain Number 1 Region: 142-424
Classification Level Classification E-value
Superfamily Nuclear receptor ligand-binding domain 5.9e-60
Family Nuclear receptor ligand-binding domain 0.00000132
Further Details:      
 
Domain Number 2 Region: 92-169
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 2.06e-24
Family Nuclear receptor 0.0000258
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Sakowv30038946m
Sequence length 452
Sequence
MEGIVIKTENPTSPESFCDRNFFDELETSYTEDSQEHRLHNLGQRSPEAAVTAERGASSQ
LESQKSNFLEQCTSSVPESQGGESQGTSKNNQRLCLVCGDVASGYHYGVASCEACKAFFK
RTVQGNIQYVCPAVNECDITKRRRKSCQSCRYGKCLVMGMMKEGVRLDRVRGGRQKYHIK
RKQECLPPAETLIAKKSKENHLIGQLLAIEPEKAYATPEDVCESVDPEVKAWAIMGNLAN
RELVGVIGWAQQLPGFTTMSLNDQMTLLQSAWNEVLILGLAYRSIPHQDTLAFADDFAMS
RNDSKEAKVDLLNDLTLRLTDRFRKLKLDKEEYVILKGLVLCNSDITHLEDPPAIERVQD
TLYDALHDHLQRHHALDKRRVIRLLLTLPLLRQISSASIHHLHQLLGRKELPLNQLIQEM
ITAKIDQEVTFLDSTKQYNNLKMESLDRSAKD
Download sequence
Identical sequences Sakowv30038946m

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]