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  Home > Genomes > Saccoglossus kowalevskii v3.0 > Sakowv30042068m

Domain assignment for Sakowv30042068m from Saccoglossus kowalevskii v3.0

Domain architecture

Domain assignment details

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Strong hits

Sequence:  Sakowv30042068m
Domain Number 1 Region: 585-696
Classification Level Classification E-value
Superfamily Spermadhesin, CUB domain 4.58e-20
Family Spermadhesin, CUB domain 0.0011
Further Details:      
 
Domain Number 2 Region: 1729-1823
Classification Level Classification E-value
Superfamily Spermadhesin, CUB domain 1.83e-19
Family Spermadhesin, CUB domain 0.0028
Further Details:      
 
Domain Number 3 Region: 748-879
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.00000000000345
Family Growth factor receptor domain 0.019
Further Details:      
 
Domain Number 4 Region: 1598-1640
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000000489
Family EGF-type module 0.0074
Further Details:      
 
Domain Number 5 Region: 1673-1712
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000000639
Family EGF-type module 0.0087
Further Details:      
 
Domain Number 6 Region: 1950-1987
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000000126
Family EGF-type module 0.0056
Further Details:      
 
Domain Number 7 Region: 2029-2066
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000000237
Family EGF-type module 0.0081
Further Details:      
 
Domain Number 8 Region: 1522-1559
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000000456
Family EGF-type module 0.0073
Further Details:      
 
Domain Number 9 Region: 723-759
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000000507
Family EGF-type module 0.004
Further Details:      
 
Domain Number 10 Region: 1833-1871
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000000547
Family EGF-type module 0.0058
Further Details:      
 
Domain Number 11 Region: 978-1109
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.0000000008
Family Growth factor receptor domain 0.011
Further Details:      
 
Domain Number 12 Region: 949-991
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000000802
Family EGF-type module 0.0093
Further Details:      
 
Domain Number 13 Region: 1410-1447
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000108
Family EGF-type module 0.0073
Further Details:      
 
Domain Number 14 Region: 1637-1678
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000132
Family EGF-type module 0.006
Further Details:      
 
Domain Number 15 Region: 1561-1602
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000177
Family EGF-type module 0.0075
Further Details:      
 
Domain Number 16 Region: 1142-1180
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000272
Family EGF-type module 0.0043
Further Details:      
 
Domain Number 17 Region: 1257-1298
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000274
Family EGF-type module 0.0061
Further Details:      
 
Domain Number 18 Region: 2092-2219
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.00000000847
Family Growth factor receptor domain 0.012
Further Details:      
 
Domain Number 19 Region: 1182-1222
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000911
Family EGF-type module 0.0079
Further Details:      
 
Domain Number 20 Region: 876-919
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000113
Family EGF-type module 0.0059
Further Details:      
 
Domain Number 21 Region: 1872-1911
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000237
Family EGF-type module 0.014
Further Details:      
 
Domain Number 22 Region: 911-953
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000391
Family EGF-type module 0.016
Further Details:      
 
Domain Number 23 Region: 1294-1336
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000544
Family EGF-type module 0.01
Further Details:      
 
Domain Number 24 Region: 1333-1371
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000639
Family EGF-type module 0.0086
Further Details:      
 
Domain Number 25 Region: 1371-1412
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000678
Family EGF-type module 0.0094
Further Details:      
 
Domain Number 26 Region: 1219-1260
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000693
Family EGF-type module 0.016
Further Details:      
 
Domain Number 27 Region: 1486-1526
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000761
Family EGF-type module 0.013
Further Details:      
 
Domain Number 28 Region: 1105-1144
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000111
Family EGF-type module 0.023
Further Details:      
 
Domain Number 29 Region: 1447-1483
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000012
Family EGF-type module 0.01
Further Details:      
 
Domain Number 30 Region: 544-580
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000348
Family EGF-type module 0.014
Further Details:      
 
Domain Number 31 Region: 373-408
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000456
Family EGF-type module 0.012
Further Details:      
 
Domain Number 32 Region: 410-451
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000693
Family EGF-type module 0.017
Further Details:      
 
Domain Number 33 Region: 223-258
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000104
Family EGF-type module 0.011
Further Details:      
 
Domain Number 34 Region: 1915-1967
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000126
Family EGF-type module 0.012
Further Details:      
 
Domain Number 35 Region: 336-372
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000134
Family EGF-type module 0.019
Further Details:      
 
Domain Number 36 Region: 298-335
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000237
Family EGF-type module 0.027
Further Details:      
 
Domain Number 37 Region: 260-301
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000454
Family EGF-type module 0.02
Further Details:      
 
Domain Number 38 Region: 1994-2046
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000629
Family EGF-type module 0.011
Further Details:      
 
Weak hits

Sequence:  Sakowv30042068m
Domain Number - Region: 2068-2103
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000399
Family EGF-type module 0.031
Further Details:      
 
Domain Number - Region: 697-722
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00267
Family EGF-type module 0.0087
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Sakowv30042068m
Sequence length 2267
Sequence 
MAIAALVFTGLLLFFLAFNTDDSFAFPTGAPQSACVSMTPGHIGISPQDSNPPFTIHVSP
IEYSSSSIAYVTISSPVPFAGIFLQARQVGETTPVGTWAEISDTSTKIITCTNPDDAITH
TTGYLPIREPTYTWIAPSSPVGNVEFIATIALNHDVFWIGIKSDVVVELGATTVSSAIAT
NKAATPVRSTPSLDVTTIAAGEHTLQPTTQIPSTNATTTGVADPCSIQPCMNGGQCTVEG
GTFLCACELGFKGETCNERVTCADNPCDNGASCFSSSDLVVTCICLPGYYGDFCQFSSDP
CRDHQCQNGAVCEGTPSDGYTCSCAEGYIGELCDVVDQCFQHDCENGATCVDTGVGYECR
CSGGFMGQLCETIDYCFENDCQHGATCMNIRVDYVCSCADGYVGGLCEKVDYCLDSLCQN
GATCVNNDSGYTCECATGFTDPLCMKEILETTAASEVSTALPPVTSAVVPVVKTTPDRRG
VTTPLPDVTTLSDHGVITAAARTTPIDTTTDVFNARTTVPEIVTTDGALKTTPSRVETTA
RFLYCSSGPCQNNAACVESVVEPFYICQCPFPYHGQDCDRMGTANCGNNYYEPSGEITSP
NFPQLYNNRDYCQYVIKVANAHSIFFSFSNFEVEENKDTCEIGPGPLADFSIPEVQAFDG
DILPPDIVYSNENQAFIIWTTDRNILKTGFRLVYSTDGDECASNPCFPGYQCNDLIQRYE
CQEIDECASFPCQHGGTCIDRINYYECVCPPSYTGQNCHIQTDPCLSDPCLNGATCNNYN
SYYTCSCLSGWTGSLCEQEINECLSTPCFYGGTCTDLINGFICECTFGYTGVNCQIEINP
CESGPCRNGGGCVNLVTTYQCQCPIGWTGPTCQTELNACAPTNPCLNGGTCNNFFTSYAC
NCAPGWQGADCELEIDMCLNGPCLNGGTCTNFQTYFVCDCPTGWIGTQCQTEINACSPNP
CQNGATCTNYYSYYTCTCPAGWEGTNCDIEIDACDPNPCQNSATCVNMQPNYACICPPTH
EGLQCEFEKNACFPNYCQNGATCVNLFTAYRCTCNAGWKGTNCETAVDLCNPVNPCMNGG
LCNNLQTSYICSCPVRYTGTHCENELNACSDNPCIHGYCNNQFTGYLCICDVGWTGQNCD
FNVDDCYNSPCQNGGTCVDQVGGYGCNCAPGYSGTSCEIITNLCSPNPCLNQGICQNYQT
SYACVCPQGWTGQNCDTAMEACLPDPCQNGATCNNFYTYHTCTCSLGWTGYNCETAINTC
EPNPCYYGGVCTNLQTHYTCECQAGWTGQNCETEINACASFPCQNDGVCQNYQVSYVCQC
PIEWTGLNCETSLNACGSNPCQNAATCLNFYTYYRCECSAGWTGTNCNEAINSCANYPCQ
NGGTCVNYQTYFGCTCLPAWTGSTCELAVTPCASDPCLNNGICQDYLYDYQCACTAAYTG
RNCETVLDACVPNRCMNGATCENHYSYFECNCAPGWRGVICDIMQDMCISGPCRNGAACS
NYQTFYECACTAGYTGPNCEFDLDECSSNPCQNGGTCTDLQNGYRCSCSLEWSGTTCTEA
RNPCLSNPCRNGGLCVNKYTFYECDCTAGWTGPSCNVDVNECASSPCLNGGICNNRINEY
VCSCPQQWTGVNCQLGVNPCSSDPCHNEAACINRLTYFTCSCIPGYTGILCETDINECTS
NPCLNSGTCVDLVDGFMCNCKSDWMGTFCEEAVGCIANFTVEAGGTLELHSPNYPSNYHD
NEYCKWIVSTVPGYVLHIRFNYFYTEFRYDIITIGNRNDVNDVGSRVLETSGTREPIDFK
SSSNVAWVTFSSDHEKTEKGFSLDLRSDSIFDDIDECNSFPCQNAGTCVNGLGMYECFCS
ASYMGINCETPTEINECASSPCPTDYICLDLQNSFVCICPEGVTGPQCNLEFKACDTNPC
YNSGTCTDIPGIGYECDCASGWTGSTCALDIDECSSNPCQNGATCVNQKNRYVCYCRDNF
DGVNCQNYNGPPGCASSPCRYGSACTNIGENAFKCDCISGKTGELCDEDINECSSNPCMN
GGTCQNRDNSFTCICRGYYSGSRCELAGCQTNPCKNGAACTEQPALEVVLCTCPAEYTGT
YCENRKPEMCTAMQNDCKNDAMCIVINQEDIICGCKAGFTGSKCELDLDDCGNQCKNGGT
CVDKPNGFECTCRPGYTGDYCESDFNECYSNPCQHGVCRDQINEYECECNAGYTGDNCET
KVVAQLEAESDLLLEPMWIAIIVILACLIIVFGIILICTYARKEYKK
Download sequence
Identical sequences Sakowv30042068m

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.