SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for Sakowv30027212m from Saccoglossus kowalevskii v3.0

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  Sakowv30027212m
Domain Number 1 Region: 218-229,375-624
Classification Level Classification E-value
Superfamily Nuclear receptor ligand-binding domain 2.23e-59
Family Nuclear receptor ligand-binding domain 0.0000473
Further Details:      
 
Domain Number 2 Region: 140-212
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 2.96e-26
Family Nuclear receptor 0.0001
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Sakowv30027212m
Sequence length 636
Sequence
MEGTQVQTIETHVVQQQQQQQQQQQQQQHQQQQQAMDTSQVVHQHHQLHPSTVTVTTVGS
NVETTTSELSKEMQTAEGLARLRHEEVITKIIQVPHVQVLQGGHAGQMQHVTLQVPQIAQ
IQQVHPIQMSPDKVVSKPMDPCVVCGDKASGRHYGVVSCEGCKGFFKRSIRKQLCYTCRG
SKDCQVTKHHRNRCQFCRLQKCLAMGMKAECKSPAILAVQCERTPIKSNRDRTSGNCAAS
TDKIYIRKDLRSPLAATPTFVGEKEKQHIGLFDQGMLINIQGGSPSVEASTANTDLSTLA
NVVTTLANMSKNKEGTSQDGAGDSSQVANGETGTTEIQASAEAVNQISKAFDTLAKALNP
QGDATETANTVEVTTSDSANGSGQGDGSDQSLPLVELEGPLLSETHFQFKLTTPSPMPQY
LNVHYICESASRLLFLSMHWARSIPAFQALGQESHTTIVQKCWSELFTLGLAECSQAMAL
SAILTAIVNHLQTSVQQDKLSADRVKVVMEHIWKLQELVNSISKLQVDSSEFAYLKAITL
FSTDHPGLVNPRQLEKFQEKAVQELQEYVTRAYPASPDRFAKLLLRLPALRLLTPSIMEE
LFFAGLIGNVQIDSIIPYILRMETADYNTQIAVQPQ
Download sequence
Identical sequences Sakowv30027212m

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]