SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for Sakowv30031936m from Saccoglossus kowalevskii v3.0

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  Sakowv30031936m
Domain Number 1 Region: 2-16,55-289
Classification Level Classification E-value
Superfamily Nuclear receptor ligand-binding domain 1.01e-58
Family Nuclear receptor ligand-binding domain 0.0000413
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Sakowv30031936m
Sequence length 290
Sequence
MNKDAVQHERGPRKTKAKINEGDTSFSVSALQLRTTEYSRVPPTMDYVTSAASYYGTFYH
SLLTAEQYNLNPLALDLNSRVKMEFGESSVDMKITPECLPEIAARLLFITVKWVKHMPSY
QILPYRDQLILLEEGWRDLFMLGLSQWSVPMDEKSILSLAKLSSENTPQEKLSQIMTEVR
HMQDNVRRLQKMGLDATEYACLKAISIFKSETHGLRDAHQVETLQDQAQVMLGDYLRHQY
ARQPVRFGKCLLMLPSLRSISSRTLEMLFFRDTIGSIPIERLLCDMFQNS
Download sequence
Identical sequences Sakowv30031936m Sakowv30031937m

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]