SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for Sakowv30037588m from Saccoglossus kowalevskii v3.0

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  Sakowv30037588m
Domain Number 1 Region: 676-890
Classification Level Classification E-value
Superfamily Macro domain-like 1.41e-48
Family Macro domain 0.00011
Further Details:      
 
Domain Number 2 Region: 962-1139
Classification Level Classification E-value
Superfamily Macro domain-like 3.87e-43
Family Macro domain 0.00024
Further Details:      
 
Domain Number 3 Region: 1201-1369
Classification Level Classification E-value
Superfamily Macro domain-like 9.25e-36
Family Macro domain 0.00046
Further Details:      
 
Domain Number 4 Region: 1610-1791
Classification Level Classification E-value
Superfamily ADP-ribosylation 1.25e-31
Family Poly(ADP-ribose) polymerase, C-terminal domain 0.036
Further Details:      
 
Domain Number 5 Region: 1509-1587
Classification Level Classification E-value
Superfamily WWE domain 0.00000000301
Family WWE domain 0.014
Further Details:      
 
Domain Number 6 Region: 112-185
Classification Level Classification E-value
Superfamily RNA-binding domain, RBD 0.00000156
Family Canonical RBD 0.016
Further Details:      
 
Weak hits

Sequence:  Sakowv30037588m
Domain Number - Region: 250-358
Classification Level Classification E-value
Superfamily Apolipoprotein A-I 0.0405
Family Apolipoprotein A-I 0.025
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Sakowv30037588m
Sequence length 1791
Sequence
MIHFGGWGREAKKQVLQRQHTIDNVTLTVKEPPKRKKLPKDKQCLLITGLADNTSKENIE
LFLESRTGIEGNSKILFGEEPDSHFQKIVQKVSERSLNGATLVVKAVTVTDSILIQNLPE
NITKDTIEFYFENQKKSGGGDVEEVTLDHEKHVAVVYFEDYQVVKSVISRHHVINGVELD
VHPYYECLGFTVSCDEPMPRIPQPLPYKVNPDIIKFIKNTDLEEFTNTMKQLYARVEWPH
QDKTDVLLLTPDLPENTNNLHKITKSWMSDLENGLDKYLQSFKGVTIPVMEGIWLQVVAQ
LKRWSQDKDACMTMDQSSCTVFLTGKSDNVSELKSRIESVVKDIKDKMQKAKERTTEKIK
VNTLQAMQLQVCEYKNLVHDKLPDVDVEIILETETLSLEGLPHDIPKAKVLMYETLERLS
TIKMKPPNTLWLQYLKTSTVSKRLHDNFSSVKIDACYLLQDDEIVCSAIDKSTLDKAVNI
IKTNIKELKIDIKPESEAALQQLEWKTMVSDLEQRKNVIISKEHNRVSIIGFETDADSVM
SELNTFIQVHTIIEDFVEAENGKLRYISEYKKDDISKIQIESRVQPFKITPKYNGPVGFV
FKGTENDVKTARVKVQKLIDVIYAHPYPVDKPGMPKLFKEEKGKNLIKLVENEINCKIDI
NHPSEIETKGAGEEAEKHFKEAALQPTLKIVCQHAIHGGRRIVVGKGDLTKMAVDVVVNS
ANTYMSYTGGLSKAIADAGGPAIHKECEAILRKQHGRLHPGQAVHTTSGKMPCKAIIHAV
GPSSNKVNHQSGYSSVRDPYSQEENLLTDAVQNSLTLAEELGYSSIGIPAISSGTMGFSL
DLCTNTIVSAVDDWAKNTPPGILLEIRLVDNSDNTCESFKHAMMKHFGEDNITPSSSGRD
KRKTHGGRRNKARQQSRGIKTAQQNSSPKHVAPNTSSIRDDELPFSSRGIQVTSNPGEIS
IREGKTVRLVKGSISSEKVDVIVNTTQPTFNLNTGAVSKSILQAAGTQLQQEINNKKTSG
VSTKAGDVIVTSGGNMQCNNIYHVLCCGWDSNGSKASQVLRKIMQNCLNTAAQSGYKSIA
FPAIGTGGLGFPRDVTAEIMYEEVIAYINDNPASSVSEIRFVVYDQDFATIQAFEDEIER
LAKTPLERRHGHGSGTRGGSFSLQKQHKNYGGYIHSGHQRLQGASGYKQESLFMNKSRGN
GYCQMMIGRIMVQLQEGDIANETTEAIVNSSDVDLDLRHGAVSRAILEKGGQSIVTECQS
QGRQQPDTVVMTGAGNLKCNKILHMISPYTKLEDSVIKMLKFAEKHKLKSIAMPAVGAGN
LELAPQNVAREILNAIGEFVQQCDPQFLEVIRITIFQSSLVAIFNKEMKSMVGTMKDTRG
VIAKTWGAIKSFVGVSDNSTRVEMIDTIILHIYADRKNIIDDAITKINQLMESESIDTTI
AKDTVNKLTDEDMSEIYQVAEPLKVKVQQIDTGRVKQLRIQGITQSVMQVQSVVNVILDR
INAEEGRKREAMLLAKNVKWMFFDDDNGDFVAYDDDICGIIEQAKNSGSSQVDFKIEEGT
YRIVFSEMIEKDLNDLSSTEVRRELKEGGVPLPSNWTTMADNETMKVEDIPVTSTEYQTV
ETRFKASLRGSYSNVIKIERVQNPRLYRQYVILKQNMDAKNPVGTINENILYHGTSGDSI
VKINHGGFNRSFSGKNATVYGAGSYFALESEYSARRIYSPVDPSGQKHVYQCKVLTGEFT
VGGEKLLVPPPKNPNDPTDCYDSVVDDVNNPQIFVVFNDAMAYPEYHITFN
Download sequence
Identical sequences Sakowv30037588m

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]