SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for Sakowv30044157m from Saccoglossus kowalevskii v3.0

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  Sakowv30044157m
Domain Number 1 Region: 192-219,328-337,407-606
Classification Level Classification E-value
Superfamily Nuclear receptor ligand-binding domain 1.13e-30
Family Nuclear receptor ligand-binding domain 0.00054
Further Details:      
 
Domain Number 2 Region: 139-228
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 9.17e-26
Family Nuclear receptor 0.00033
Further Details:      
 
Domain Number 3 Region: 47-123
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 4.89e-21
Family Nuclear receptor 0.00062
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Sakowv30044157m
Sequence length 629
Sequence
FTECTVHTTENAVFIFHFLGYCDNSYKEFTVQGSTDPGNRCVMSDLPPCQICGESSSGYH
CGAYTCEACKRFFLRSTKVNSKGEVPKYICPKVGNCEMTRSTRIHCQYCRLQKCLAVGMA
RKGTPEADKLPDLKKLPKEPCAVCGAPSSGFHFGATTCEGCKGFFRRSVEERNCGDYKCK
KSKSCIITKDTRSSCQYCRFQKCLQVKMDKTKIRMGRQPNHVKHMILSKKQTEDGPTSPS
NSLGSPQSNYSPSFSETISSVSSPPCTLDHDSTSSPPGADSAFCPIFQQNVTQELYLVKA
ENSSWTQSPSSPNDFLYDSHCHHQHQYSNSSPSPVSPLDKDSALSYSDTLLQIEDLALVE
STPYIEQNSPMLANHMAGFIEEIVDAYKELHTMYNGKPRLKKHIDVVNVSNLWDKLMTSF
QNNVHSLLAFTKRIPGFRSLHVDDQIILIQCSICQVSLTVLAEDLMNTGRVYSWSLETKE
ELQLLKEKFDPFNIFPSRIALTAEEFKAVDLDPTEISLLTALHVVCKDRSKLKDPESVYK
IQNQLNEALAIYVAIRDIGTNNNRYKSVVSLLRKLKNMEEKHHSCVMVWRKTMPHLQFPA
LWTEVHEMVLHNAEDLQPGQTEFQHFNKK
Download sequence
Identical sequences Sakowv30044157m

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]