SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSSSCP00000000705 from Sus scrofa 76_10.2

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSSSCP00000000705
Domain Number 1 Region: 966-1250
Classification Level Classification E-value
Superfamily Terpenoid cyclases/Protein prenyltransferases 1.24e-81
Family Complement components 0.0000291
Further Details:      
 
Domain Number 2 Region: 795-915
Classification Level Classification E-value
Superfamily E set domains 7.28e-34
Family SVA-like 0.0075
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSSSCP00000000705   Gene: ENSSSCG00000000664   Transcript: ENSSSCT00000000720
Sequence length 1250
Comment pep:known_by_projection chromosome:Sscrofa10.2:5:65445195:65479118:-1 gene:ENSSSCG00000000664 transcript:ENSSSCT00000000720 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
GRFIYMLLLVNRPLVLDPEESVPPTKINYLVTLPAQLVFPSTQKVCLDLSPGYDAVKFTV
TLETKDRILTLLRQSGLKTRHLHCRSFLVPLPADGREEVATVRVSGTGKGISFEEKKKVL
IQRQQNGLFIQTDKPVYNPGQKVQLRIVTLTSSFIPVNDKYSLVELQDPNNNRIAQWLDV
VPKQGIVDLSFQLAPEATLGTYRVAVNGGEGQSFGTFSVEEYVLPKFKVEVVEPKQLSTV
EDSFLVKVCCRYTYGKPILGIVHVSVCQKANTYRFREPELEQLPDRCRNISGWADKAGCL
SASVDMSTFNLTGYLYRQDINIVATVVEEGTGVEANTTQDIYISSEAGSMTFEDTDSFYH
PNFPFSGKIRVRGHNGSLLKRHSVFLVIRDIHGTTIQTLTTDSDGRAPFQLDTAHWNGRD
VSLEGRFQLEDLPYDPERAPRYYRNAYLHLQPFYNTTRSFLDIHRLHGILECGRTQEVLV
DYYIDPADVNPDQEVVFSYYLTGKGNLELEGQKHLNLNFKKKGLKGSFSLPLTFNSRLAP
DPSLVVYAIFPSGGVIADKIQFSVEMCFDNQVSLGFSPSQQLPGADVDLQLRAAPGSLCA
VRAVDESVLLLRPESELSNRSVYGMFPFWYGHYPYQVAEYDECPVSGPWDFPRPLMAPVP
EERWSRPSVLWRPWFSKGTDLFSFFQDMGLKILSNAKIKKPVECSHRPLAEYSHAMGGGP
GFARPTAFTTSSVQEVDSQVRQYFPETWIWDLFPIGNSGKEAIQVTVPDTITTWKAMTFC
TSQSRGFGLSPTVGLTAFKPFFVDLTLPYSVVRGESFRLTATIFNYLKKCIRVQTNLATS
DEYQVGSWPDSQASSCLCADEAKSYHWNITAVKLGHINFTISTTILDSSELCGGQKGFVP
EKGRSDTLIKPVLVKPEGVLVEKTHSSLLCPKGSVASESVSLEVPVDVVPDSAKAYITVL
GDIMGTALQNLDKLVQMPSGCGEQNMVLFAPIIYVLQYLEKSGLLTEEIRSRAVGYLKLG
YQRELMYKHSDGSYSAFGERDGSGNTWLTAFVTKCFGQAQKFIFIDDKNIEDALKWMAGN
QLSSGCYANVGKLLHTAMKGGVDDEVSLTAYITAALLEMGKTRDDPMVSQGLQCLKNSAS
STTSLYTQALLAYTFSLAGEMDLRNMLLEKLDQQAIISGESIHWSQKPTRSSNASPWSEP
EAVEVELTAYALLAWLSKADLTQKEIAKATGIVAWLTKQQNAYGGFSSTQ
Download sequence
Identical sequences ENSSSCP00000000705 ENSSSCP00000000705

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]