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Domain assignment for ENSSSCP00000002178 from Sus scrofa 76_10.2

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSSSCP00000002178
Domain Number 1 Region: 1-242,351-442
Classification Level Classification E-value
Superfamily Protein prenylyltransferase 2.62e-92
Family Protein prenylyltransferase 0.0000000000128
Further Details:      
 
Domain Number 2 Region: 241-350
Classification Level Classification E-value
Superfamily Rab geranylgeranyltransferase alpha-subunit, insert domain 8.11e-50
Family Rab geranylgeranyltransferase alpha-subunit, insert domain 0.00000237
Further Details:      
 
Domain Number 3 Region: 442-560
Classification Level Classification E-value
Superfamily Outer arm dynein light chain 1 8.63e-23
Family Outer arm dynein light chain 1 0.0036
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSSSCP00000002178   Gene: ENSSSCG00000001992   Transcript: ENSSSCT00000002230
Sequence length 567
Comment pep:known chromosome:Sscrofa10.2:7:80293068:80298827:1 gene:ENSSSCG00000001992 transcript:ENSSSCT00000002230 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MHGRLKVKTSEEQAEAKRLEREQKLKLYQTATQTVFQKRQAGELDESVLELTSQILGANP
DFATLWNCRREVLQRLEVQKSPEELAALVKAELGFLESCLRVNPKSYGTWHHRCWLLGRL
PEPNWARELELCARFLEVDERNFHCWDYRRFVASQAAVPPAEELAFTDSLITRNFSNYSS
WHYRSCLLPQLHPQPDSGPQGRLPEDVLLKELELVQNAFFTDPNDQSAWFYHRWLLGRAD
PQDALRCLHVSRDEACLTVSFSRPLLVGPSTETLLLMVNESPLSVEWRTPDGRNRPSHVW
LCDLPAASLNDHLPQHTFRVIWTAGNAQKECVLLKGRQEGWCRDSATDEQLFRCELSVEK
STVLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFQTLKAVDPMRAA
YLDDLRSKFLLENSVLKMEYADVRVLHLGHKDLTVLCHLEQLLLVTHLDLSHNRLRALPP
ALAALRCLEVLQANDNAIESLDGVTNLPRLQELSLCNNRLQQPAVLQPLASCPRLVLLNL
QDNPLCQAVGISEHLAELLPSVSSILT
Download sequence
Identical sequences A5A779
ENSSSCP00000002178 ENSSSCP00000002178 9823.ENSSSCP00000002178 NP_001092063.1.46622 XP_005666280.1.46622

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