SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSSSCP00000002888 from Sus scrofa 76_10.2

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSSSCP00000002888
Domain Number 1 Region: 112-299
Classification Level Classification E-value
Superfamily Outer arm dynein light chain 1 1.83e-35
Family Outer arm dynein light chain 1 0.00064
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSSSCP00000002888   Gene: ENSSSCG00000002675   Transcript: ENSSSCT00000002967
Sequence length 630
Comment pep:known_by_projection chromosome:Sscrofa10.2:6:5039182:5061510:-1 gene:ENSSSCG00000002675 transcript:ENSSSCT00000002967 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MHPEALEPVTDGEAEQEGAQEPGVEESAGDSGNAGQGDRKEEINDPKETCVGPSDTSYLS
EQKQSGDSCADSRSAHQRDDKEDRGPRMTKTFLRKLCKQHKLYMTPALNDTLYLHFKGFD
RIENLDEYTGLRCLWLECNGIQKIENLEAQTELRCLFLQVNLLHKIENLEPLQKLDALNL
SNNYIKTIENLSCLPVLNTLQMAHNHLETVQDIQHLKECLKLCVLDLSHNKLSDPEILSV
LESMADLRVLNLMGNPVTRTIPNYRRTVTVRLKHLTYLDDRPVFPKDRACAEAWARGGYA
AEKEERQQWERRERKKITDSIEALAAIKRQAEERKQQKASREPGDVPAPDNAEDMDASVE
GQEEPPEDKERQQKMQLFEVKDSFEAKDQLFPEMSEKSSLPEELPAEELPADVHGEPGGQ
EPGGVLPTEAPQPSPGAAWEVLEAIRLATKEKLFIDDLPDLEDVDAGGSPGDQDKQMSFP
KITAISSWSDDSDPELDYTSLPELENAAPDALSNIFALPRAASRRAEPEPLFSALYEAAA
EGELDTRSRATRGPGPLIQELDDDRESSGHPSPPPGCDPSRSEGQDGGPLVATPPGIGLE
RDTAPAETEPEARLEPDVGEDREDLEFGLD
Download sequence
Identical sequences 9823.ENSSSCP00000002888 ENSSSCP00000002888 ENSSSCP00000002888

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]