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Domain assignment for ENSSSCP00000003229 from Sus scrofa 76_10.2

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSSSCP00000003229
Domain Number 1 Region: 297-402
Classification Level Classification E-value
Superfamily SRCR-like 1.44e-43
Family Scavenger receptor cysteine-rich (SRCR) domain 0.0000599
Further Details:      
 
Domain Number 2 Region: 181-293
Classification Level Classification E-value
Superfamily Spermadhesin, CUB domain 1.02e-34
Family Spermadhesin, CUB domain 0.00029
Further Details:      
 
Domain Number 3 Region: 411-525
Classification Level Classification E-value
Superfamily Spermadhesin, CUB domain 5.1e-32
Family Spermadhesin, CUB domain 0.00041
Further Details:      
 
Domain Number 4 Region: 48-146
Classification Level Classification E-value
Superfamily SRCR-like 3.66e-23
Family Scavenger receptor cysteine-rich (SRCR) domain 0.0006
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSSSCP00000003229   Gene: ENSSSCG00000002981   Transcript: ENSSSCT00000003311
Sequence length 869
Comment pep:known_by_projection chromosome:Sscrofa10.2:6:43728928:43753129:-1 gene:ENSSSCG00000002981 transcript:ENSSSCT00000003311 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
TDAQRSSTVIPDWWYTTTPSQKTAFVRMAVLASWHQAPSPQASPRSVLGLALVNGGDRCQ
GHVEVLYRLVGHVCDDSWDTNDASGVCRQLGCGRAESAPGSAQFGQGSGLIVLDDTAWSG
HETYAWSCPHNTNIRCALHWEVLCTDGQGSEKSCSKAKDLLSPSTSWWHPTTTTTASPSS
PCGGFLTSASGTFSSPSYPGLYPNNANCVWEIEVNSGYRINLGFNNLQLEVHINCIYDYI
EIFDESPGSNTSLGKICNHTSQIFTSSYNRMTVRFRSDGSVQKPGFSAWYNSFPRDASLR
LVNSNSSYPSCAGRVEIYQGGRWGTVCDDGWDIQDAQVVCRQLGCGNAVSAPGNAYFGPG
SGPITLDDVACSGTESTLWQCRNRGWFSHNCGHSEDAGVICSVPDFTTTPPATNYSCGGF
LSQAAGGFNSPFYPGNYPNNANCVWDIEVQNNYRVTVVFRDVQLEGGCNFDYIEVFDGPY
RSSPLLARVCNGASGSFTSSSNFMSIRFISDVSVTRAGFRANYYSSPSPGSTRLHCLQNH
MQASVSTSYLQSLGYSARDLVIPGWEWSYQCQPQITSTQVTFTIPYSSCGTIQRVDNDTI
TYSNSLRAAVSSGIIKRKKDLHMYVSCRMLQNTWVNTVYIANDTLEVQNVQYGNFDVNIS
FFTSSSFLYPVRSSPYYVDLNQNLYLQAEILHANASLALFVDTCVASPYPNDFTTLTYDL
IRSGCVKDETYQSYSQPSPRIVRFKFSSFHFLSRFPSVYLQCKMVVCRAFDSSSRCRRGC
VVRSKRDVGSYQEKVDVVLGPIQLQTLHAEKRSLDQPAVDLEEKASTQGSYDGAAISAGI
FLVVVLAVAAFTLGRRGRAADGQPLISKT
Download sequence
Identical sequences ENSSSCP00000003229 ENSSSCP00000003229

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