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Domain assignment for ENSSSCP00000003704 from Sus scrofa 76_10.2

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSSSCP00000003704
Domain Number 1 Region: 1032-1194
Classification Level Classification E-value
Superfamily Multidrug efflux transporter AcrB transmembrane domain 0.0000000392
Family Multidrug efflux transporter AcrB transmembrane domain 0.017
Further Details:      
 
Weak hits

Sequence:  ENSSSCP00000003704
Domain Number - Region: 435-473
Classification Level Classification E-value
Superfamily Multidrug efflux transporter AcrB transmembrane domain 0.00209
Family Multidrug efflux transporter AcrB transmembrane domain 0.042
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSSSCP00000003704   Gene: ENSSSCG00000030627   Transcript: ENSSSCT00000003791
Sequence length 1242
Comment pep:novel scaffold:Sscrofa10.2:GL893027.2:26083:57823:1 gene:ENSSSCG00000030627 transcript:ENSSSCT00000003791 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MDSEDDPLLQDVWLEEEQEEEEEAASEAFRKAQKPGPQAGAGGQCCWRRWTLPSGPPASG
FWNTLGWAFTNPCCAGLVLFLGCSIPTALSAFMFLYYPPPFEIRNHEASQRFDALTLALK
SQFGSWGRNRRDXAAASRKPLPASSQGPAYVXIELIFLARGDAERNIFTKIERKIMDHPG
FREFCWKPHEVLKDLPLGSYSYCSPPSSLMTYFFPTERGGKIYYDGMGQDLADIRGSLEL
AMTHPEFYWYVDEGLSAENLKSSLLRSEILFGAPLPNYYSVDDRWEEQRAKFQSFVVTYV
AMLAKQSTRAVIPMPFGLPPGQASPWHRRDPSFRNTLLPLLSNLCVFTPVGLSTSTAPFL
LYKGELASVPSFELMSIYICLIITGGSWKGKLKSLDFFILFGSELIELSVFYSNERSINP
FNSTKLRMVGKVFEGGKATFFTSLTTAAAYAANVFSQIPAVHDFGLFMSLIVSCLVXLPR
PLMRSPALIPAPDSLHSCHQKCGRKSSLHFPGDMFATPEPAGDIPLLNVEEEPAVSLELG
DVSLVSMPPEGLGPAPDRGSRGQLIIQLQELLHNWVLWSAVKSRWVIVGLFVSILILSLV
FASRLRPASRAPLLFRPDTNIQVLLDLKYNLSAEGISCITCSGLFQEKPHSLQNNIRTSL
EKKKRGSGVSWTGRPETTLQAWVPGSLCISKVKSRGHPAVYRFSLNASLPAPWQIVSPGD
GEVPSFQVYRAPFGNFTKKLTACVSTVGLLGEPPSRKWMVTTLACDAKRGWKFDFSFYVV
TALRMSLARVFAPTPDPQPSHTRPRSSLTRSPGPSKRAILFHPAKRLKXARLSATFGFNP
CMNTGCGKPAVRPLVDTGAMVFVVFGIIGINRTRQVDNHVHKVIWEPGGVRGDDRGQGGS
PGAKGGGRQRQVHAXGNSELVKPGGAQCLPSGYSISSFLQMLHPECKELPEPHLLPGQLS
HGAVGVARGQPQLSQRRSPQTTYKGKSSFQTYSDYLRWESFLQQQLQTLPEGSALHRGFQ
TCEHWKQIFMEIIGVQSALYGLALSLLICVAAVAVFTTHVLLLLPVLLSILEAKRASVTV
THRTVGFRGEPDVTRCHQXSILVGSSVDYCVHLVEGYLLXPPSSPLAHTQDAHSQRQWRT
LEAVRHVGVXVIATVPLFFCIIAPFAKFGKIVALNTGVSILYTLTVSTALLGIMAPGSFT
RTRTSFLKALGAVLLAGALGLGACLLLLQSGYKIPLPNGTSL
Download sequence
Identical sequences ENSSSCP00000003704

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