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Domain assignment for ENSSSCP00000004150 from Sus scrofa 76_10.2

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSSSCP00000004150
Domain Number 1 Region: 135-168
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000654
Family LDL receptor-like module 0.0017
Further Details:      
 
Domain Number 2 Region: 75-123
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.00000772
Family TSP-1 type 1 repeat 0.0036
Further Details:      
 
Weak hits

Sequence:  ENSSSCP00000004150
Domain Number - Region: 511-550
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000723
Family EGF-type module 0.029
Further Details:      
 
Domain Number - Region: 555-569
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.0379
Family TSP-1 type 1 repeat 0.006
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSSSCP00000004150   Gene: ENSSSCG00000003834   Transcript: ENSSSCT00000004245
Sequence length 610
Comment pep:known_by_projection chromosome:Sscrofa10.2:6:143164815:143205954:1 gene:ENSSSCG00000003834 transcript:ENSSSCT00000004245 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MSLSQISCRIEKMKTSGTWAWRMPAKLFLLCAALGCLSLPGSRGERPHSLESNAVNESLG
KSRQTRSVDVTLTPIDCELSSWSSWTTCDPCQKKRYRHASLLRPSQFHGEPCNFSDKEVE
DCVSNRPCRSQVRCEGFVCAQTGRCINRRLLCNGDNDCGDQSDEANCKRIYKKCQQEMDQ
YWAIGSLASGINLFTNNLEGPVLDHRYYAGACSPHYILNTRFRKPYNVENFNPQTQGKYD
FALTEYESYSDFEQNVTTAAISKSSFSFGFKISGMFEFGISSTSDKGKRFISRTKRFSHT
KSTFLHARSDLEVARYKLKSRNLMLHYEFLQRVKQLPLEYSYGEYRDLFRDFGTHYITEA
VLGGVYEYTLIMNKEAMERADYSLKDVHACAQHGFKIGVAIEEVYIKLGVSVHKCKDILN
EIKDRNKRSSMVNDLVVLVRGGASEHITALAYKDLPTADLMQEWGDAVQYNPDIIKIKAE
PLYELVTAADFAYSSTVKQNMKRALEEFEKEISSCHCAPCQGNGVPVLKESRCDCICPAG
FQGSACEVTNRKNVPIDGKWNCWSDWSPCLEDVKQDEGSATIHLLKMGAAPAWVLLQKHL
TVKEGRASSG
Download sequence
Identical sequences ENSSSCP00000004150 ENSSSCP00000004150

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