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Domain assignment for ENSSSCP00000005460 from Sus scrofa 76_10.2

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSSSCP00000005460
Domain Number 1 Region: 1186-1332
Classification Level Classification E-value
Superfamily L domain-like 3.74e-21
Family Internalin LRR domain 0.012
Further Details:      
 
Domain Number 2 Region: 1042-1131
Classification Level Classification E-value
Superfamily Outer arm dynein light chain 1 0.000000235
Family Outer arm dynein light chain 1 0.024
Further Details:      
 
Weak hits

Sequence:  ENSSSCP00000005460
Domain Number - Region: 523-596
Classification Level Classification E-value
Superfamily ADP-ribosylation 0.0187
Family Poly(ADP-ribose) polymerase, C-terminal domain 0.016
Further Details:      
 
Domain Number - Region: 50-93
Classification Level Classification E-value
Superfamily L domain-like 0.0986
Family Internalin LRR domain 0.054
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSSSCP00000005460   Gene: ENSSSCG00000005081   Transcript: ENSSSCT00000005600
Sequence length 1440
Comment pep:novel chromosome:Sscrofa10.2:1:210023488:210151165:1 gene:ENSSSCG00000005081 transcript:ENSSSCT00000005600 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MIECEDLNQEEIIKELCLCNGLSYEMIGQKGSDTSKLEMFFSGYPRIVGLSLFPNLTSLT
IVAQDIKEISGLETCLQLKELWIAECCIEESEQIMAINLKSPIKLYNHIQIGENSFSVSK
IEKHWSWRGVFVKTNASEFLWKGGLNSHLGGCMHNSTVFHSYSLNLHRIVNFKDFLLLLA
YYKLGHLRKAYVYFFSKRVLQISNYTWHLLFKERTFNHHKTIYVNHKVIKFTVSSLRMPH
IVNPLSLPVKTLSSRLTSKVIHCEEFSCHLCQSPRESLFQDLRFRLKSLSSGCWEFHVRK
GSAAEFPKKSSVEGSHYLEFPVPFLALAFLGDQVTWTDSRPIQKMIPLYMKLKKHKIWAI
TNFSYVTLCFQHFKESLLSPLFNSCYELILSRFCTWDFRTYGITGVKVKRVIKVNNRILR
LKFEEKFQKFLDNEDMQDSESYRKMLECLFYVFDPEVTVKKKHLLQILEKGFKDSETSKL
PLRKEAVILANSLSMCECPRIEFLQQKYKDEKINSFEHELFRHGILLITKVFLGQSVQAR
DQDSISQANYPMLNSVFIPRKYLLRQRNCDCSVRQCKWFVFDHDLVLPEYIVEFEYITVV
KAHSLFSFNVILEESKKSSERSLLSQDLKFDDEVIKMDPRIKPRPKLISLDDKTILSLAK
TSIYSHIVTMNLEGNLKKYGSLTSYSGDRKGLRPSFHKIVIMLHMYFLFDLRILLKNHDK
KYTLQRFPFYVKSGRIKLSDFKRLQLNWKDCNVLFSTKLFFYKVNVSAWENPQTEDISVS
SILKYLSHLLIFSSLQNRALLKEITTLKKVTQMVLIAHCKSSLLLIYVYLKWPSTPSFQN
QKHLGPRRHASLLHLTQLTRLPLILGLSFFPYYIISFQKTNLFYGFSSNFLNLYLQSCVH
LQNPFLYPQCQNKILGTFKDARYSTNSPHSGSKNLVSRWFYNNLMQMQNLSAKNNLITMV
ATEERQWLVGRLYYILNNTVLINHHILQSLCHNTPLLSIVTAIVLIKTETVSFMFVAAFP
NINCLHLAQITTGKQEWKRIIISKNLPSGFSAIRQGPFFESLHLLRFTLSKFRTVDLVPV
DQFRNVCNVNLQNNNLTSFSGLIYLPNVKVLCLNYNHIESIMPRLKPQTHLINRQLLYQK
VPSSGYGQQGSAKINRGSAGGCWLGLYLEAGFLEVFFLKFNSFCCILKIQLKRIKSLKWK
FLKRNCISQMEGISKLTKLTHLSINNNLLTGLEKHTFDNMLHLHSLSLENNRITSLSGLQ
KAFTLIELYISNNYIALNQEIYNLKKIEIGPSIGEITIISGSPICRKMLHRHVLIFRLPN
LQMLDGIPVNSDDRAKAEFHFSELQAKKNLIRQRNLLYLKKSLRATLKISLPIKFIPVTN
SPVDGGSFGQVKAPPIKITNVIPPGGFSHYLGSDFTLTPEVEGISTEFLSEWEKTNNGNQ
Download sequence
Identical sequences ENSSSCP00000005460 ENSSSCP00000005460

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