SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSSSCP00000006525 from Sus scrofa 76_10.2

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSSSCP00000006525
Domain Number 1 Region: 102-204
Classification Level Classification E-value
Superfamily TAFH domain-like 2.09e-39
Family TAFH domain-like 0.00000134
Further Details:      
 
Domain Number 2 Region: 494-536
Classification Level Classification E-value
Superfamily HIT/MYND zinc finger-like 0.000000000126
Family MYND zinc finger 0.00022
Further Details:      
 
Weak hits

Sequence:  ENSSSCP00000006525
Domain Number - Region: 428-502
Classification Level Classification E-value
Superfamily CAPPD, an extracellular domain of amyloid beta A4 protein 0.000942
Family CAPPD, an extracellular domain of amyloid beta A4 protein 0.0093
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSSSCP00000006525   Gene: ENSSSCG00000006115   Transcript: ENSSSCT00000006707
Sequence length 586
Comment pep:known_by_projection chromosome:Sscrofa10.2:4:48110058:48171842:1 gene:ENSSSCG00000006115 transcript:ENSSSCT00000006707 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MVTLSKTAQVLNRTEKHSTMPDSPVDVKTPSRLTPPTMPPPPTTQGAPRTSSFTPTTFTN
NQSQSPEALNGAPSPPNGFSNGPSSSSSSSLANQQLPPACGARQLSKLKRFLTTLQQFGN
DISPEIGERVRTLVLGLVNSTLTIEEFHSKLQEATNFPLRPFVIPFLKANLPLLQRELLH
CARLAKQNPAQYLAQHEQLLLDASTTSPVDSSELLLDVNENGKRRTPDRTKENGFDREPL
HSEHPSKRPCTISPGQRYSPNNGLSYQPNGLPHPTPPPPQHYRLDDMAIAHHYRDSYRHP
SHRDLRDRNRPMGLHGTRQEEMIDHRLTDREWAEEWKHLDHLLNCIMDMVEKTRRSLTVL
RRCQEADREELNYWIRRYSDAEDLKKGGSSSSSHSRQQSPVNPDPVALDAHREFLHRPAS
GYVPEEIWKKAEEAVNEVKRQAMTELQKAVSEAERKAHDMITSERAKMERTVAEAKRQAA
EDALAVINQQEDSSESCWNCGRKASETCSGCNTARYCGSFCQHKDWEKHHHICGQTLQAQ
QQGDTPAVSSSVTPNSGAGSPMDTPPAATPRSTTPGTPSTIETTPR
Download sequence
Identical sequences ENSSSCP00000006525 ENSSSCP00000006525

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]