SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSSSCP00000012194 from Sus scrofa 76_10.2

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSSSCP00000012194
Domain Number 1 Region: 284-428
Classification Level Classification E-value
Superfamily Outer arm dynein light chain 1 1.01e-33
Family Outer arm dynein light chain 1 0.001
Further Details:      
 
Domain Number 2 Region: 22-119
Classification Level Classification E-value
Superfamily PX domain 6.8e-22
Family PX domain 0.0026
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSSSCP00000012194   Gene: ENSSSCG00000011442   Transcript: ENSSSCT00000012522
Sequence length 1592
Comment pep:known_by_projection chromosome:Sscrofa10.2:13:37809488:37844066:1 gene:ENSSSCG00000011442 transcript:ENSSSCT00000012522 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MAAAARSFGPEPEAEPAKEARVVGSELVDTYTVYIIQVTDGSHEWTVKHRYSDFHDLHEK
LVAEKKIDKSLLPPKKIIGKNSRSLVEKREKDLEVYLQTLLATFPDVAPRVLAHFLHFHF
YEINGITAALAEELFEKGEQLLGAGEVFAIGPLQLYAVTEQLQQGKPTCASGDAKTDLGH
ILDFTCRLKYLKVSGTEGPFGTSNIQEQHLPFDLSIFKSLHQVEISHCDAKHIRGLVASK
PTLATMSVCFSATSMKEVLVPEASEFDEWEPAGAALEGPVTAIIPTWQALTALDLSHNSI
SEIDESVKKLIPKIEFLDLSHNGVLVVDNLQHLYNLVHLDLSYNKLSSLEGVHTKLGNIK
TLNLAGNLLGSLHGLHKLYSLVNLDLSNNRIEQMEEVRSIGSLPCLEHVALLNNPLSIIP
DYRTKVLAQFGERASEVCLDNTVTTEKELDTVEVLKAIQKAKEVKSKLSNTEKKVSEDSR
LSAATCIRPSGSPPTVAPTSASLPQPILSNQGIMFVQEEALASSLSSTDSLTPEDRPIAR
GCSDSLESIPAGQALCDEIRDVPGAVGGASPEHSEPEVQVVPGSGQIIFLPFTCIGYTAT
NQDFIQRLSTLIRQAIERQLPAWIEAANQREEGRGEQGEEEEEEEEEDVAENRYFEMGPP
DVEEEEEGGPGEEEEEEEEEEEEEGEEGEEERLALEWALGADEDFLLEHIRILKVLWCFL
IHVQGSIRQFAACLVLTDFGIAVFEIPHQESRGSSQHILSSLRFVFCFPHGDLTEFGFLM
PELCLVLKVRHSENTLFIISDATNLHEFHADLRSCFAPQHMAMLCSPVLYGSHTSLQEFL
RQLLTFYKVAGGCQERSQGCFPVYLVYSDKRMVQTAAGDYSGNIEWASCTLCSAVRRSCC
APSEAVKSAAIPYWLLLTPQHLNVIKADFNPMPNRGTHNCRNRNSFKLSRVPLSTVLLDP
TRSCTQPRGAFADGHVLELLVGYRFVTAIFVLPHEKFHFLRIYNQLRASLQDLKTVVIAK
TPATGGRPQSPLADGQPTEGRARLQERPRKGPASLLPQPSPSAVAPRSGCCSSLFLAEPG
ALLMPSTSAMPSVENPDASRCYARGGLAGPSPHLPTSMKREALEEVPVPALAPAEAPGLA
KIPAPAEASEPALVLPEAPTEASASEETPAEASAGASVPAPAEGTAQAEAPAQYPSERLI
QSMSEENQIPSHLPACPSLQHIASLQGSAVVEFFHNSIAEVENEELRHLLWSSVVFYQTP
GLEVTACVLLSTKAVYFVLHDGLRRYFSEPLQDFWHQKNTDYNNSPFHISQCFVLKLSDL
QTVNVGLFDQYFRLTGSSPAQVVTCLTRDSYLTHCFLQHVMAVLSLLERTPSPEPVDKDF
YSEFGNKTTGKVENYELIHSSRVKFTYPSEEEIGDLTFTVAQKMADPEKAPGLSILLYVQ
AFQVGMPLPGRCRGLLRPKTLLLTSAEIFLLDEDFVHYPLPEFAKEPPQRDRYRLDDGRR
VRDLDRVLMGYQTYPQALTLVFDDVQGHDLMGSVTLDHFGEEPGGPARAGQGREVQWQVF
IPSAESREKLISLLARQWEALCGRELPVELTG
Download sequence
Identical sequences ENSSSCP00000012194 ENSSSCP00000012194

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]